1dju: Difference between revisions

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-{{Seed}}
-[[Image:1dju.png|left|200px]]
-<!--
+==CRYSTAL STRUCTURE OF AROMATIC AMINOTRANSFERASE FROM PYROCOCCUS HORIKOSHII OT3==
-The line below this paragraph, containing "STRUCTURE_1dju", creates the "Structure Box" on the page.
+<StructureSection load='1dju' size='340' side='right'caption='[[1dju]], [[Resolution|resolution]] 2.10&Aring;' scene=''>
-You may change the PDB parameter (which sets the PDB file loaded into the applet)
+== Structural highlights ==
-or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+<table><tr><td colspan='2'>[[1dju]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Pyrococcus_horikoshii_OT3 Pyrococcus horikoshii OT3]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1DJU OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1DJU FirstGlance]. <br>
-or leave the SCENE parameter empty for the default display.
+</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.1&#8491;</td></tr>
--->
+<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=PLP:PYRIDOXAL-5-PHOSPHATE'>PLP</scene></td></tr>
-{{STRUCTURE_1dju|  PDB=1dju  |  SCENE=  }}
+<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1dju FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1dju OCA], [https://pdbe.org/1dju PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1dju RCSB], [https://www.ebi.ac.uk/pdbsum/1dju PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1dju ProSAT]</span></td></tr>
+</table>
-===CRYSTAL STRUCTURE OF AROMATIC AMINOTRANSFERASE FROM PYROCOCCUS HORIKOSHII OT3===
+== Function ==
+[https://www.uniprot.org/uniprot/O59096_PYRHO O59096_PYRHO]
+== Evolutionary Conservation ==
-<!--
+[[Image:Consurf_key_small.gif|200px|right]]
-The line below this paragraph, {{ABSTRACT_PUBMED_10671523}}, adds the Publication Abstract to the page
+Check<jmol>
-(as it appears on PubMed at http://www.pubmed.gov), where 10671523 is the PubMed ID number.
+  <jmolCheckbox>
--->
+    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/dj/1dju_consurf.spt"</scriptWhenChecked>
-{{ABSTRACT_PUBMED_10671523}}
+    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
+    <text>to colour the structure by Evolutionary Conservation</text>
-==About this Structure==
+  </jmolCheckbox>
-DJU is a 2 chains structure of sequences from [http://en.wikipedia.org/wiki/Pyrococcus_horikoshii Pyrococcus horikoshii]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1DJU OCA].
+</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1dju ConSurf].
+<div style="clear:both"></div>
-==Reference==
+__TOC__
-<ref group="xtra">PMID:10671523</ref><references group="xtra"/>
+</StructureSection>
-[[Category: Pyrococcus horikoshii]]
+[[Category: Large Structures]]
-[[Category: Kawarabayashi, H.]]
+[[Category: Pyrococcus horikoshii OT3]]
-[[Category: Kikuchi, H.]]
+[[Category: Kawarabayashi H]]
-[[Category: Matsui, E.]]
+[[Category: Kikuchi H]]
-[[Category: Matsui, I.]]
+[[Category: Matsui E]]
-[[Category: Sakai, Y.]]
+[[Category: Matsui I]]
-[[Category: Alpha/beta/alpha]]
+[[Category: Sakai Y]]
-''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Tue Feb 17 15:08:04 2009''