1hxx: Difference between revisions

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OCA

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-{{Seed}}
-[[Image:1hxx.png|left|200px]]
-<!--
+==OMPF PORIN MUTANT Y106F==
-The line below this paragraph, containing "STRUCTURE_1hxx", creates the "Structure Box" on the page.
+<StructureSection load='1hxx' size='340' side='right'caption='[[1hxx]], [[Resolution|resolution]] 2.20&Aring;' scene=''>
-You may change the PDB parameter (which sets the PDB file loaded into the applet)
+== Structural highlights ==
-or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+<table><tr><td colspan='2'>[[1hxx]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Escherichia_coli Escherichia coli]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1HXX OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1HXX FirstGlance]. <br>
-or leave the SCENE parameter empty for the default display.
+</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.2&#8491;</td></tr>
--->
+<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=C8E:(HYDROXYETHYLOXY)TRI(ETHYLOXY)OCTANE'>C8E</scene></td></tr>
-{{STRUCTURE_1hxx|  PDB=1hxx  |  SCENE=  }}
+<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1hxx FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1hxx OCA], [https://pdbe.org/1hxx PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1hxx RCSB], [https://www.ebi.ac.uk/pdbsum/1hxx PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1hxx ProSAT]</span></td></tr>
+</table>
+== Function ==
+[https://www.uniprot.org/uniprot/OMPF_ECOLI OMPF_ECOLI] Forms pores that allow passive diffusion of small molecules across the outer membrane. It is also a receptor for the bacteriophage T2.<ref>PMID:19721064</ref>
+== Evolutionary Conservation ==
+[[Image:Consurf_key_small.gif|200px|right]]
+Check<jmol>
+  <jmolCheckbox>
+    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/hx/1hxx_consurf.spt"</scriptWhenChecked>
+    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
+    <text>to colour the structure by Evolutionary Conservation</text>
+  </jmolCheckbox>
+</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1hxx ConSurf].
+<div style="clear:both"></div>
-===OMPF PORIN MUTANT Y106F===
+==See Also==
+*[[Porin 3D structures|Porin 3D structures]]
+== References ==
-<!--
+<references/>
-The line below this paragraph, {{ABSTRACT_PUBMED_11371193}}, adds the Publication Abstract to the page
+__TOC__
-(as it appears on PubMed at http://www.pubmed.gov), where 11371193 is the PubMed ID number.
+</StructureSection>
--->
-{{ABSTRACT_PUBMED_11371193}}
-==About this Structure==
-HXX is a 1 chain structure of sequence from [http://en.wikipedia.org/wiki/Escherichia_coli Escherichia coli]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1HXX OCA].
-==Reference==
-<ref group="xtra">PMID:11371193</ref><references group="xtra"/>
 [[Category: Escherichia coli]]
-[[Category: Phale, P S.]]
+[[Category: Large Structures]]
-[[Category: Phale, V P.]]
+[[Category: Phale PS]]
-[[Category: Philippsen, A.]]
+[[Category: Phale VP]]
-[[Category: Rosenbusch, J P.]]
+[[Category: Philippsen A]]
-[[Category: Schirmer, T.]]
+[[Category: Rosenbusch JP]]
-[[Category: Widmer, C.]]
+[[Category: Schirmer T]]
-[[Category: Beta barrel]]
+[[Category: Widmer C]]
-[[Category: Membrane protein]]
-[[Category: Porin]]
-''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Tue Feb 17 14:52:23 2009''