1x7v: Difference between revisions

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Proteopedia Page Contributors and Editors (what is this?)Proteopedia Page Contributors and Editors (what is this?)

OCA

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-{{Seed}}
-[[Image:1x7v.png|left|200px]]
-<!--
+==Crystal structure of PA3566 from Pseudomonas aeruginosa==
-The line below this paragraph, containing "STRUCTURE_1x7v", creates the "Structure Box" on the page.
+<StructureSection load='1x7v' size='340' side='right'caption='[[1x7v]], [[Resolution|resolution]] 1.78&Aring;' scene=''>
-You may change the PDB parameter (which sets the PDB file loaded into the applet)
+== Structural highlights ==
-or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+<table><tr><td colspan='2'>[[1x7v]] is a 3 chain structure with sequence from [https://en.wikipedia.org/wiki/Pseudomonas_aeruginosa Pseudomonas aeruginosa]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1X7V OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1X7V FirstGlance]. <br>
-or leave the SCENE parameter empty for the default display.
+</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.78&#8491;</td></tr>
--->
+<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
-{{STRUCTURE_1x7v|  PDB=1x7v  |  SCENE=  }}
+<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1x7v FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1x7v OCA], [https://pdbe.org/1x7v PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1x7v RCSB], [https://www.ebi.ac.uk/pdbsum/1x7v PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1x7v ProSAT], [https://www.topsan.org/Proteins/MCSG/1x7v TOPSAN]</span></td></tr>
+</table>
-===Crystal structure of PA3566 from Pseudomonas aeruginosa===
+== Function ==
+[https://www.uniprot.org/uniprot/Q9HY51_PSEAE Q9HY51_PSEAE]
+== Evolutionary Conservation ==
-==About this Structure==
+[[Image:Consurf_key_small.gif|200px|right]]
-X7V is a 3 chains structure of sequences from [http://en.wikipedia.org/wiki/Pseudomonas_aeruginosa Pseudomonas aeruginosa]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1X7V OCA].
+Check<jmol>
+  <jmolCheckbox>
-==Reference==
+    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/x7/1x7v_consurf.spt"</scriptWhenChecked>
-<ref group="xtra">PMID:16049913</ref><references group="xtra"/>
+    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
+    <text>to colour the structure by Evolutionary Conservation</text>
+  </jmolCheckbox>
+</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1x7v ConSurf].
+<div style="clear:both"></div>
+__TOC__
+</StructureSection>
+[[Category: Large Structures]]
 [[Category: Pseudomonas aeruginosa]]
-[[Category: Edwards, A.]]
+[[Category: Edwards A]]
-[[Category: Gorodichtchenskaia, E.]]
+[[Category: Gorodichtchenskaia E]]
-[[Category: Joachimiak, A.]]
+[[Category: Joachimiak A]]
-[[Category: MCSG, Midwest Center for Structural Genomics.]]
+[[Category: Sanders DA]]
-[[Category: Sanders, D A.]]
+[[Category: Savchenko A]]
-[[Category: Savchenko, A.]]
+[[Category: Skarina T]]
-[[Category: Skarina, T.]]
+[[Category: Walker JR]]
-[[Category: Walker, J R.]]
-[[Category: Alpha-beta plait]]
-[[Category: Mcsg]]
-[[Category: Midwest center for structural genomic]]
-[[Category: Protein structure initiative]]
-[[Category: Psi]]
-[[Category: Structural genomic]]
-''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Tue Feb 17 10:27:09 2009''