1orj: Difference between revisions

← Older edit

Proteopedia Page Contributors and Editors (what is this?)Proteopedia Page Contributors and Editors (what is this?)

OCA

@@ Line 1: / Line 1: @@
-{{Seed}}
-[[Image:1orj.png|left|200px]]
-<!--
+==FLAGELLAR EXPORT CHAPERONE==
-The line below this paragraph, containing "STRUCTURE_1orj", creates the "Structure Box" on the page.
+<StructureSection load='1orj' size='340' side='right'caption='[[1orj]], [[Resolution|resolution]] 2.25&Aring;' scene=''>
-You may change the PDB parameter (which sets the PDB file loaded into the applet)
+== Structural highlights ==
-or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+<table><tr><td colspan='2'>[[1orj]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Aquifex_aeolicus_VF5 Aquifex aeolicus VF5]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1ORJ OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1ORJ FirstGlance]. <br>
-or leave the SCENE parameter empty for the default display.
+</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.25&#8491;</td></tr>
--->
+<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1orj FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1orj OCA], [https://pdbe.org/1orj PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1orj RCSB], [https://www.ebi.ac.uk/pdbsum/1orj PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1orj ProSAT]</span></td></tr>
-{{STRUCTURE_1orj|  PDB=1orj  |  SCENE=  }}
+</table>
+== Function ==
+[https://www.uniprot.org/uniprot/O67806_AQUAE O67806_AQUAE]
+== Evolutionary Conservation ==
+[[Image:Consurf_key_small.gif|200px|right]]
+Check<jmol>
+  <jmolCheckbox>
+    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/or/1orj_consurf.spt"</scriptWhenChecked>
+    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
+    <text>to colour the structure by Evolutionary Conservation</text>
+  </jmolCheckbox>
+</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1orj ConSurf].
+<div style="clear:both"></div>
-===FLAGELLAR EXPORT CHAPERONE===
+==See Also==
+*[[Flagellar protein 3D structures|Flagellar protein 3D structures]]
+__TOC__
-<!--
+</StructureSection>
-The line below this paragraph, {{ABSTRACT_PUBMED_12958592}}, adds the Publication Abstract to the page
+[[Category: Aquifex aeolicus VF5]]
-(as it appears on PubMed at http://www.pubmed.gov), where 12958592 is the PubMed ID number.
+[[Category: Large Structures]]
--->
+[[Category: Evdokimov AG]]
-{{ABSTRACT_PUBMED_12958592}}
+[[Category: Peters III HK]]
+[[Category: Phan J]]
-==About this Structure==
+[[Category: Pokross M]]
-ORJ is a 4 chains structure of sequences from [http://en.wikipedia.org/wiki/Aquifex_aeolicus_vf5 Aquifex aeolicus vf5]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1ORJ OCA].
+[[Category: Routzahn KM]]
+[[Category: Tropea JE]]
-==Reference==
+[[Category: Waugh DS]]
-<ref group="xtra">PMID:12958592</ref><references group="xtra"/>
-[[Category: Aquifex aeolicus vf5]]
-[[Category: Evdokimov, A G.]]
-[[Category: III, H K.Peters.]]
-[[Category: Phan, J.]]
-[[Category: Pokross, M.]]
-[[Category: Routzahn, K M.]]
-[[Category: Tropea, J E.]]
-[[Category: Waugh, D S.]]
-[[Category: Chaperone]]
-[[Category: Flagellar export]]
-[[Category: Flagellin]]
-[[Category: Flagellum]]
-[[Category: Four helix bundle]]
-''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Tue Feb 17 09:41:57 2009''