1d7y: Difference between revisions

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[[Image:1d7y.png|left|200px]]


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==CRYSTAL STRUCTURE OF NADH-DEPENDENT FERREDOXIN REDUCTASE, BPHA4==
The line below this paragraph, containing "STRUCTURE_1d7y", creates the "Structure Box" on the page.
<StructureSection load='1d7y' size='340' side='right'caption='[[1d7y]], [[Resolution|resolution]] 2.10&Aring;' scene=''>
You may change the PDB parameter (which sets the PDB file loaded into the applet)
== Structural highlights ==
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
<table><tr><td colspan='2'>[[1d7y]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Pseudomonas_sp._KKS102 Pseudomonas sp. KKS102]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1D7Y OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1D7Y FirstGlance]. <br>
or leave the SCENE parameter empty for the default display.
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.1&#8491;</td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=FAD:FLAVIN-ADENINE+DINUCLEOTIDE'>FAD</scene></td></tr>
{{STRUCTURE_1d7y|  PDB=1d7y  |  SCENE=  }}
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1d7y FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1d7y OCA], [https://pdbe.org/1d7y PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1d7y RCSB], [https://www.ebi.ac.uk/pdbsum/1d7y PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1d7y ProSAT]</span></td></tr>
 
</table>
===CRYSTAL STRUCTURE OF NADH-DEPENDENT FERREDOXIN REDUCTASE, BPHA4===
== Function ==
 
[https://www.uniprot.org/uniprot/Q52437_PSES1 Q52437_PSES1]
 
== Evolutionary Conservation ==
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[[Image:Consurf_key_small.gif|200px|right]]
The line below this paragraph, {{ABSTRACT_PUBMED_11090282}}, adds the Publication Abstract to the page
Check<jmol>
(as it appears on PubMed at http://www.pubmed.gov), where 11090282 is the PubMed ID number.
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    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/d7/1d7y_consurf.spt"</scriptWhenChecked>
{{ABSTRACT_PUBMED_11090282}}
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
 
    <text>to colour the structure by Evolutionary Conservation</text>
==About this Structure==
  </jmolCheckbox>
1D7Y is a 1 chain structure of sequence from [http://en.wikipedia.org/wiki/Pseudomonas_sp. Pseudomonas sp.]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1D7Y OCA].  
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1d7y ConSurf].
 
<div style="clear:both"></div>
==Reference==
__TOC__
<ref group="xtra">PMID:11090282</ref><references group="xtra"/>
</StructureSection>
[[Category: Pseudomonas sp.]]
[[Category: Large Structures]]
[[Category: Fukuda, M.]]
[[Category: Pseudomonas sp. KKS102]]
[[Category: Kubota, M.]]
[[Category: Fukuda M]]
[[Category: Masai, E.]]
[[Category: Kubota M]]
[[Category: Mitsui, Y.]]
[[Category: Masai E]]
[[Category: Nishizaki, T.]]
[[Category: Mitsui Y]]
[[Category: Sakurai, N.]]
[[Category: Nishizaki T]]
[[Category: Senda, T.]]
[[Category: Sakurai N]]
[[Category: Yamada, T.]]
[[Category: Senda T]]
[[Category: Flavoprotein rossmann fold]]
[[Category: Yamada T]]
 
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Tue Feb 17 04:45:13 2009''

Latest revision as of 09:50, 7 February 2024

CRYSTAL STRUCTURE OF NADH-DEPENDENT FERREDOXIN REDUCTASE, BPHA4CRYSTAL STRUCTURE OF NADH-DEPENDENT FERREDOXIN REDUCTASE, BPHA4

Structural highlights

1d7y is a 1 chain structure with sequence from Pseudomonas sp. KKS102. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Method:X-ray diffraction, Resolution 2.1Å
Ligands:
Resources:FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT

Function

Q52437_PSES1

Evolutionary Conservation

Check, as determined by ConSurfDB. You may read the explanation of the method and the full data available from ConSurf.

1d7y, resolution 2.10Å

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)Proteopedia Page Contributors and Editors (what is this?)

OCA
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