2i4t: Difference between revisions

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-{{Seed}}
-[[Image:2i4t.png|left|200px]]
-<!--
+==Crystal structure of Purine Nucleoside Phosphorylase from Trichomonas vaginalis with Imm-A==
-The line below this paragraph, containing "STRUCTURE_2i4t", creates the "Structure Box" on the page.
+<StructureSection load='2i4t' size='340' side='right'caption='[[2i4t]], [[Resolution|resolution]] 2.74&Aring;' scene=''>
-You may change the PDB parameter (which sets the PDB file loaded into the applet)
+== Structural highlights ==
-or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+<table><tr><td colspan='2'>[[2i4t]] is a 3 chain structure with sequence from [https://en.wikipedia.org/wiki/Trichomonas_vaginalis Trichomonas vaginalis]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2I4T OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2I4T FirstGlance]. <br>
-or leave the SCENE parameter empty for the default display.
+</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.74&#8491;</td></tr>
--->
+<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=PO4:PHOSPHATE+ION'>PO4</scene>, <scene name='pdbligand=UA2:3,4-PYRROLIDINEDIOL,2-(4-AMINO-5H-PYRROLO[3,2-D]PYRIMIDIN-7-YL)-5-(HYDROXYMETHYL)-2S,3S,4R,5R'>UA2</scene></td></tr>
-{{STRUCTURE_2i4t|  PDB=2i4t  |  SCENE=  }}
+<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2i4t FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2i4t OCA], [https://pdbe.org/2i4t PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2i4t RCSB], [https://www.ebi.ac.uk/pdbsum/2i4t PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2i4t ProSAT]</span></td></tr>
+</table>
+== Function ==
+[https://www.uniprot.org/uniprot/A2E7Y6_TRIV3 A2E7Y6_TRIV3]
+== Evolutionary Conservation ==
+[[Image:Consurf_key_small.gif|200px|right]]
+Check<jmol>
+  <jmolCheckbox>
+    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/i4/2i4t_consurf.spt"</scriptWhenChecked>
+    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
+    <text>to colour the structure by Evolutionary Conservation</text>
+  </jmolCheckbox>
+</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2i4t ConSurf].
+<div style="clear:both"></div>
-===Crystal stucture of Purine Nucleoside Phosphorylase from Trichomonas vaginalis with Imm-A===
+==See Also==
+*[[Purine nucleoside phosphorylase 3D structures|Purine nucleoside phosphorylase 3D structures]]
+__TOC__
-<!--
+</StructureSection>
-The line below this paragraph, {{ABSTRACT_PUBMED_17223688}}, adds the Publication Abstract to the page
+[[Category: Large Structures]]
-(as it appears on PubMed at http://www.pubmed.gov), where 17223688 is the PubMed ID number.
--->
-{{ABSTRACT_PUBMED_17223688}}
-==About this Structure==
-I4T is a 3 chains structure of sequences from [http://en.wikipedia.org/wiki/Trichomonas_vaginalis Trichomonas vaginalis]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2I4T OCA].
-==Reference==
-<ref group="xtra">PMID:17223688</ref><references group="xtra"/>
-[[Category: Purine-nucleoside phosphorylase]]
 [[Category: Trichomonas vaginalis]]
-[[Category: Almo, S C.]]
+[[Category: Almo SC]]
-[[Category: Rinaldo-Matthis, A.]]
+[[Category: Rinaldo-Matthis A]]
-[[Category: Schramm, V L.]]
+[[Category: Schramm VL]]
-[[Category: Purine nucleoside phosphorylase]]
-''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Tue Feb 17 02:40:17 2009''