1jku: Difference between revisions

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{{Seed}}
[[Image:1jku.png|left|200px]]


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==Crystal Structure of Manganese Catalase from Lactobacillus plantarum==
The line below this paragraph, containing "STRUCTURE_1jku", creates the "Structure Box" on the page.
<StructureSection load='1jku' size='340' side='right'caption='[[1jku]], [[Resolution|resolution]] 1.84&Aring;' scene=''>
You may change the PDB parameter (which sets the PDB file loaded into the applet)  
== Structural highlights ==
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
<table><tr><td colspan='2'>[[1jku]] is a 6 chain structure with sequence from [https://en.wikipedia.org/wiki/Lactiplantibacillus_plantarum Lactiplantibacillus plantarum]. The September 2004 RCSB PDB [https://pdb.rcsb.org/pdb/static.do?p=education_discussion/molecule_of_the_month/index.html Molecule of the Month] feature on ''Catalase''  by David S. Goodsell is [https://dx.doi.org/10.2210/rcsb_pdb/mom_2004_9 10.2210/rcsb_pdb/mom_2004_9]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1JKU OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1JKU FirstGlance]. <br>
or leave the SCENE parameter empty for the default display.
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.84&#8491;</td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=MN3:MANGANESE+(III)+ION'>MN3</scene>, <scene name='pdbligand=OH:HYDROXIDE+ION'>OH</scene></td></tr>
{{STRUCTURE_1jku| PDB=1jku |  SCENE= }}
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1jku FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1jku OCA], [https://pdbe.org/1jku PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1jku RCSB], [https://www.ebi.ac.uk/pdbsum/1jku PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1jku ProSAT]</span></td></tr>
</table>
== Function ==
[https://www.uniprot.org/uniprot/MCAT_LACPN MCAT_LACPN]
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
Check<jmol>
  <jmolCheckbox>
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/jk/1jku_consurf.spt"</scriptWhenChecked>
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
    <text>to colour the structure by Evolutionary Conservation</text>
  </jmolCheckbox>
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1jku ConSurf].
<div style="clear:both"></div>


===Crystal Structure of Manganese Catalase from Lactobacillus plantarum===
==See Also==
 
*[[Catalase|Catalase]]
 
*[[Catalase 3D structures|Catalase 3D structures]]
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{{ABSTRACT_PUBMED_11587647}}
 
==About this Structure==
1JKU is a 6 chains structure of sequences from [http://en.wikipedia.org/wiki/Lactobacillus_plantarum Lactobacillus plantarum]. The September 2004 RCSB PDB [http://pdb.rcsb.org/pdb/static.do?p=education_discussion/molecule_of_the_month/index.html Molecule of the Month] feature on ''Catalase''  by David S. Goodsell is [http://dx.doi.org/10.2210/rcsb_pdb/mom_2004_9 10.2210/rcsb_pdb/mom_2004_9]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1JKU OCA].
 
==Reference==
<ref group="xtra">PMID:11587647</ref><references group="xtra"/>
[[Category: Catalase]]
[[Category: Catalase]]
[[Category: Lactobacillus plantarum]]
[[Category: Lactiplantibacillus plantarum]]
[[Category: Antonyuk, S V.]]
[[Category: Large Structures]]
[[Category: Artymiuk, P J.]]
[[Category: RCSB PDB Molecule of the Month]]
[[Category: Barynin, V V.]]
[[Category: Antonyuk SV]]
[[Category: Harrison, P M.]]
[[Category: Artymiuk PJ]]
[[Category: Lamzin, V S.]]
[[Category: Barynin VV]]
[[Category: Whittaker, J W.]]
[[Category: Harrison PM]]
[[Category: Whittaker, M M.]]
[[Category: Lamzin VS]]
[[Category: Catalase dimanganese]]
[[Category: Whittaker JW]]
[[Category: Hexamer]]
[[Category: Whittaker MM]]
[[Category: Metalloenzyme]]
 
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Tue Feb 17 00:35:18 2009''

Latest revision as of 10:40, 7 February 2024

Crystal Structure of Manganese Catalase from Lactobacillus plantarumCrystal Structure of Manganese Catalase from Lactobacillus plantarum

Structural highlights

1jku is a 6 chain structure with sequence from Lactiplantibacillus plantarum. The September 2004 RCSB PDB Molecule of the Month feature on Catalase by David S. Goodsell is 10.2210/rcsb_pdb/mom_2004_9. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Method:X-ray diffraction, Resolution 1.84Å
Ligands:, ,
Resources:FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT

Function

MCAT_LACPN

Evolutionary Conservation

Check, as determined by ConSurfDB. You may read the explanation of the method and the full data available from ConSurf.

See Also

1jku, resolution 1.84Å

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