3bip: Difference between revisions

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{{Seed}}
[[Image:3bip.png|left|200px]]


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==Crystal structure of yeast Spt16 N-terminal Domain==
The line below this paragraph, containing "STRUCTURE_3bip", creates the "Structure Box" on the page.
<StructureSection load='3bip' size='340' side='right'caption='[[3bip]], [[Resolution|resolution]] 1.94&Aring;' scene=''>
You may change the PDB parameter (which sets the PDB file loaded into the applet)
== Structural highlights ==
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
<table><tr><td colspan='2'>[[3bip]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Saccharomyces_cerevisiae Saccharomyces cerevisiae]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3BIP OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3BIP FirstGlance]. <br>
or leave the SCENE parameter empty for the default display.
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.94&#8491;</td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3bip FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3bip OCA], [https://pdbe.org/3bip PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3bip RCSB], [https://www.ebi.ac.uk/pdbsum/3bip PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3bip ProSAT]</span></td></tr>
{{STRUCTURE_3bip|  PDB=3bip  |  SCENE=  }}
</table>
 
== Function ==
===Crystal structure of yeast Spt16 N-terminal Domain===
[https://www.uniprot.org/uniprot/SPT16_YEAST SPT16_YEAST]
 
== Evolutionary Conservation ==
 
[[Image:Consurf_key_small.gif|200px|right]]
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Check<jmol>
The line below this paragraph, {{ABSTRACT_PUBMED_18089575}}, adds the Publication Abstract to the page
  <jmolCheckbox>
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    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/bi/3bip_consurf.spt"</scriptWhenChecked>
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    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
{{ABSTRACT_PUBMED_18089575}}
    <text>to colour the structure by Evolutionary Conservation</text>
 
  </jmolCheckbox>
==About this Structure==
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3bip ConSurf].
3BIP is a 2 chains structure of sequences from [http://en.wikipedia.org/wiki/Saccharomyces_cerevisiae Saccharomyces cerevisiae]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3BIP OCA].  
<div style="clear:both"></div>
 
__TOC__
==Reference==
</StructureSection>
<ref group="xtra">PMID:18089575</ref><references group="xtra"/>
[[Category: Large Structures]]
[[Category: Saccharomyces cerevisiae]]
[[Category: Saccharomyces cerevisiae]]
[[Category: Bentley, S.]]
[[Category: Bentley S]]
[[Category: David, S J.]]
[[Category: David SJ]]
[[Category: Formosa, T.]]
[[Category: Formosa T]]
[[Category: Heroux, A.]]
[[Category: Heroux A]]
[[Category: Hill, C P.]]
[[Category: Hill CP]]
[[Category: McCullough, L.]]
[[Category: McCullough L]]
[[Category: Rawlins, R.]]
[[Category: Rawlins R]]
[[Category: VanDemark, A P.]]
[[Category: VanDemark AP]]
[[Category: Xin, H.]]
[[Category: Xin H]]
[[Category: Activator]]
[[Category: Aminopeptidase]]
[[Category: Chromatin]]
[[Category: Chromosomal protein]]
[[Category: Coiled coil]]
[[Category: Dna damage]]
[[Category: Dna repair]]
[[Category: Dna replication]]
[[Category: Fact]]
[[Category: Nucleus]]
[[Category: Phosphoprotein]]
[[Category: Pita-bread]]
[[Category: Replication]]
[[Category: Repressor]]
[[Category: Transcription]]
[[Category: Transcription regulation]]
 
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Mon Feb 16 18:00:57 2009''

Latest revision as of 12:29, 21 February 2024

Crystal structure of yeast Spt16 N-terminal DomainCrystal structure of yeast Spt16 N-terminal Domain

Structural highlights

3bip is a 2 chain structure with sequence from Saccharomyces cerevisiae. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Method:X-ray diffraction, Resolution 1.94Å
Resources:FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT

Function

SPT16_YEAST

Evolutionary Conservation

Check, as determined by ConSurfDB. You may read the explanation of the method and the full data available from ConSurf.

3bip, resolution 1.94Å

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)Proteopedia Page Contributors and Editors (what is this?)

OCA
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