2vlc: Difference between revisions

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{{Seed}}
[[Image:2vlc.jpg|left|200px]]


<!--
==Crystal structure of Natural Cinnamomin (Isoform III)==
The line below this paragraph, containing "STRUCTURE_2vlc", creates the "Structure Box" on the page.
<StructureSection load='2vlc' size='340' side='right'caption='[[2vlc]], [[Resolution|resolution]] 2.95&Aring;' scene=''>
You may change the PDB parameter (which sets the PDB file loaded into the applet)
== Structural highlights ==
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
<table><tr><td colspan='2'>[[2vlc]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Cinnamomum_camphora Cinnamomum camphora]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2VLC OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2VLC FirstGlance]. <br>
or leave the SCENE parameter empty for the default display.
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.95&#8491;</td></tr>
-->
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=BMA:BETA-D-MANNOSE'>BMA</scene>, <scene name='pdbligand=NAG:N-ACETYL-D-GLUCOSAMINE'>NAG</scene>, <scene name='pdbligand=XYP:BETA-D-XYLOPYRANOSE'>XYP</scene></td></tr>
{{STRUCTURE_2vlc|  PDB=2vlc |  SCENE= }}
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2vlc FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2vlc OCA], [https://pdbe.org/2vlc PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2vlc RCSB], [https://www.ebi.ac.uk/pdbsum/2vlc PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2vlc ProSAT]</span></td></tr>
</table>
== Function ==
[https://www.uniprot.org/uniprot/Q94BW3_CINCA Q94BW3_CINCA]
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
Check<jmol>
  <jmolCheckbox>
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/vl/2vlc_consurf.spt"</scriptWhenChecked>
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
    <text>to colour the structure by Evolutionary Conservation</text>
  </jmolCheckbox>
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2vlc ConSurf].
<div style="clear:both"></div>


===CRYSTAL STRUCTURE OF NATURAL CINNAMOMIN (ISOFORM III)===
==See Also==
 
*[[Ribosome inactivating protein 3D structures|Ribosome inactivating protein 3D structures]]
 
__TOC__
==About this Structure==
</StructureSection>
2VLC is a 2 chains structure of sequences from [http://en.wikipedia.org/wiki/Cinnamomum_camphora Cinnamomum camphora]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2VLC OCA].
 
==Reference==
<ref group="xtra">PMID:18837036</ref><references group="xtra"/>
[[Category: Cinnamomum camphora]]
[[Category: Cinnamomum camphora]]
[[Category: RRNA N-glycosylase]]
[[Category: Large Structures]]
[[Category: Azzi, A.]]
[[Category: Azzi A]]
[[Category: Lin, S X.]]
[[Category: Lin S-X]]
[[Category: Liu, W Y.]]
[[Category: Liu W-Y]]
[[Category: Wang, T.]]
[[Category: Wang T]]
[[Category: Zhu, D W.]]
[[Category: Zhu D-W]]
[[Category: Zou, Y S.]]
[[Category: Zou Y-S]]
[[Category: Cinnamomin]]
[[Category: Hydrolase]]
[[Category: N-glycosidase]]
[[Category: Plant defense]]
[[Category: Protein synthesis inhibitor]]
[[Category: Ribosome inhibiting protein]]
[[Category: Toxin]]
 
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Feb 11 12:36:51 2009''

Latest revision as of 10:47, 9 October 2024

Crystal structure of Natural Cinnamomin (Isoform III)Crystal structure of Natural Cinnamomin (Isoform III)

Structural highlights

2vlc is a 2 chain structure with sequence from Cinnamomum camphora. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Method:X-ray diffraction, Resolution 2.95Å
Ligands:, ,
Resources:FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT

Function

Q94BW3_CINCA

Evolutionary Conservation

Check, as determined by ConSurfDB. You may read the explanation of the method and the full data available from ConSurf.

See Also

2vlc, resolution 2.95Å

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)Proteopedia Page Contributors and Editors (what is this?)

OCA
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