3fle: Difference between revisions

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OCA

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-{{Seed}}
-[[Image:3fle.jpg|left|200px]]
-<!--
+==SE_1780 protein of unknown function from Staphylococcus epidermidis.==
-The line below this paragraph, containing "STRUCTURE_3fle", creates the "Structure Box" on the page.
+<StructureSection load='3fle' size='340' side='right'caption='[[3fle]], [[Resolution|resolution]] 2.01&Aring;' scene=''>
-You may change the PDB parameter (which sets the PDB file loaded into the applet)
+== Structural highlights ==
-or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+<table><tr><td colspan='2'>[[3fle]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Staes Staes]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3FLE OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3FLE FirstGlance]. <br>
-or leave the SCENE parameter empty for the default display.
+</td></tr><tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
--->
+<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">SE_1780 ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=176280 STAES])</td></tr>
-{{STRUCTURE_3fle|  PDB=3fle  |  SCENE=  }}
+<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3fle FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3fle OCA], [https://pdbe.org/3fle PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3fle RCSB], [https://www.ebi.ac.uk/pdbsum/3fle PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3fle ProSAT], [https://www.topsan.org/Proteins/MCSG/3fle TOPSAN]</span></td></tr>
+</table>
-===SE_1780 protein of unknown function from Staphylococcus epidermidis.===
+== Evolutionary Conservation ==
+[[Image:Consurf_key_small.gif|200px|right]]
+Check<jmol>
-==About this Structure==
+  <jmolCheckbox>
-FLE is a 2 chains structure of sequences from [http://en.wikipedia.org/wiki/Staphylococcus_epidermidis_atcc_12228 Staphylococcus epidermidis atcc 12228]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3FLE OCA].
+    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/fl/3fle_consurf.spt"</scriptWhenChecked>
-[[Category: Staphylococcus epidermidis atcc 12228]]
+    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
-[[Category: Clancy, S.]]
+    <text>to colour the structure by Evolutionary Conservation</text>
-[[Category: Hatzos, C.]]
+  </jmolCheckbox>
-[[Category: Joachimiak, A.]]
+</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3fle ConSurf].
-[[Category: Kim, Y.]]
+<div style="clear:both"></div>
-[[Category: MCSG, Midwest Center for Structural Genomics.]]
+__TOC__
-[[Category: Osipiuk, J.]]
+</StructureSection>
+[[Category: Large Structures]]
+[[Category: Staes]]
+[[Category: Clancy, S]]
+[[Category: Hatzos, C]]
+[[Category: Joachimiak, A]]
+[[Category: Kim, Y]]
+[[Category: Structural genomic]]
+[[Category: Osipiuk, J]]
 [[Category: Apc61035 1]]
 [[Category: Mcsg]]
-[[Category: Midwest center for structural genomic]]
+[[Category: PSI, Protein structure initiative]]
-[[Category: Protein structure initiative]]
-[[Category: Psi-2]]
-[[Category: Structural genomic]]
 [[Category: Unknown function]]
-''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Jan 14 13:38:24 2009''