1wae: Difference between revisions

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New page: left|200px<br /> <applet load="1wae" size="450" color="white" frame="true" align="right" spinBox="true" caption="1wae, resolution 1.95Å" /> '''CRYSTAL STRUCTURE O...
 
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[[Image:1wae.gif|left|200px]]<br />
<applet load="1wae" size="450" color="white" frame="true" align="right" spinBox="true"
caption="1wae, resolution 1.95&Aring;" />
'''CRYSTAL STRUCTURE OF H129V MUTANT OF ALCALIGENES XYLOSOXIDANS NITRITE REDUCTASE'''<br />


==Overview==
==Crystal structure of H129V Mutant of Alcaligenes Xylosoxidans Nitrite Reductase==
Copper nitrite reductases contain both an electron-transfer type 1 Cu site, and a catalytic type 2 Cu site. We have mutated one of the type 2 copper, ligating histidines to observe the effect on catalytic turnover. This, mutation has created a unique site where Cu is ligated by 2 His Nepsilon2, atoms alone.
<StructureSection load='1wae' size='340' side='right'caption='[[1wae]], [[Resolution|resolution]] 1.95&Aring;' scene=''>
== Structural highlights ==
<table><tr><td colspan='2'>[[1wae]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Achromobacter_xylosoxidans Achromobacter xylosoxidans]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1WAE OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1WAE FirstGlance]. <br>
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.95&#8491;</td></tr>
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CU:COPPER+(II)+ION'>CU</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1wae FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1wae OCA], [https://pdbe.org/1wae PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1wae RCSB], [https://www.ebi.ac.uk/pdbsum/1wae PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1wae ProSAT]</span></td></tr>
</table>
== Function ==
[https://www.uniprot.org/uniprot/O68601_ALCXX O68601_ALCXX]
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
Check<jmol>
  <jmolCheckbox>
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/wa/1wae_consurf.spt"</scriptWhenChecked>
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
    <text>to colour the structure by Evolutionary Conservation</text>
  </jmolCheckbox>
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1wae ConSurf].
<div style="clear:both"></div>
<div style="background-color:#fffaf0;">
== Publication Abstract from PubMed ==
Copper nitrite reductases contain both an electron-transfer type 1 Cu site and a catalytic type 2 Cu site. We have mutated one of the type 2 copper ligating histidines to observe the effect on catalytic turnover. This mutation has created a unique site where Cu is ligated by 2 His Nepsilon2 atoms alone.


==About this Structure==
Observation of an unprecedented Cu Bis-His site: crystal structure of the H129V mutant of nitrite reductase.,Ellis MJ, Antonyuk SV, Strange RW, Sawers G, Eady RR, Hasnain SS Inorg Chem. 2004 Nov 29;43(24):7591-3. PMID:15554622<ref>PMID:15554622</ref>
1WAE is a [[http://en.wikipedia.org/wiki/Single_protein Single protein]] structure of sequence from [[http://en.wikipedia.org/wiki/Alcaligenes_xylosoxydans_xylosoxydans Alcaligenes xylosoxydans xylosoxydans]] with CU and ZN as [[http://en.wikipedia.org/wiki/ligands ligands]]. Active as [[http://en.wikipedia.org/wiki/ ]], with EC number [[http://www.brenda-enzymes.info/php/result_flat.php4?ecno=1.7.99.3 1.7.99.3]]. Full crystallographic information is available from [[http://ispc.weizmann.ac.il/oca-bin/ocashort?id=1WAE OCA]].


==Reference==
From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
Observation of an unprecedented Cu Bis-His site: crystal structure of the H129V mutant of nitrite reductase., Ellis MJ, Antonyuk SV, Strange RW, Sawers G, Eady RR, Hasnain SS, Inorg Chem. 2004 Nov 29;43(24):7591-3. PMID:[http://ispc.weizmann.ac.il//pmbin/getpm?pmid=15554622 15554622]
</div>
[[Category: Alcaligenes xylosoxydans xylosoxydans]]
<div class="pdbe-citations 1wae" style="background-color:#fffaf0;"></div>
[[Category: Single protein]]
[[Category: Antonyuk, S.V.]]
[[Category: Eady, R.R.]]
[[Category: Ellis, M.J.]]
[[Category: Hasnain, S.S.]]
[[Category: Sawers, G.]]
[[Category: Strange, R.W.]]
[[Category: CU]]
[[Category: ZN]]
[[Category: copper protein]]
[[Category: nitrite reductase]]
[[Category: reductase]]


''Page seeded by [http://ispc.weizmann.ac.il/oca OCA ] on Mon Oct 29 21:17:38 2007''
==See Also==
*[[Nitrite reductase 3D structures|Nitrite reductase 3D structures]]
== References ==
<references/>
__TOC__
</StructureSection>
[[Category: Achromobacter xylosoxidans]]
[[Category: Large Structures]]
[[Category: Antonyuk SV]]
[[Category: Eady RR]]
[[Category: Ellis MJ]]
[[Category: Hasnain SS]]
[[Category: Sawers G]]
[[Category: Strange RW]]

Latest revision as of 16:26, 13 December 2023

Crystal structure of H129V Mutant of Alcaligenes Xylosoxidans Nitrite ReductaseCrystal structure of H129V Mutant of Alcaligenes Xylosoxidans Nitrite Reductase

Structural highlights

1wae is a 1 chain structure with sequence from Achromobacter xylosoxidans. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Method:X-ray diffraction, Resolution 1.95Å
Ligands:,
Resources:FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT

Function

O68601_ALCXX

Evolutionary Conservation

Check, as determined by ConSurfDB. You may read the explanation of the method and the full data available from ConSurf.

Publication Abstract from PubMed

Copper nitrite reductases contain both an electron-transfer type 1 Cu site and a catalytic type 2 Cu site. We have mutated one of the type 2 copper ligating histidines to observe the effect on catalytic turnover. This mutation has created a unique site where Cu is ligated by 2 His Nepsilon2 atoms alone.

Observation of an unprecedented Cu Bis-His site: crystal structure of the H129V mutant of nitrite reductase.,Ellis MJ, Antonyuk SV, Strange RW, Sawers G, Eady RR, Hasnain SS Inorg Chem. 2004 Nov 29;43(24):7591-3. PMID:15554622[1]

From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.

See Also

References

  1. Ellis MJ, Antonyuk SV, Strange RW, Sawers G, Eady RR, Hasnain SS. Observation of an unprecedented Cu Bis-His site: crystal structure of the H129V mutant of nitrite reductase. Inorg Chem. 2004 Nov 29;43(24):7591-3. PMID:15554622 doi:10.1021/ic048966p

1wae, resolution 1.95Å

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