1lxn: Difference between revisions

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-{{Seed}}
-[[Image:1lxn.png|left|200px]]
-<!--
+==X-RAY STRUCTURE OF MTH1187 NORTHEAST STRUCTURAL GENOMICS CONSORTIUM TARGET TT272==
-The line below this paragraph, containing "STRUCTURE_1lxn", creates the "Structure Box" on the page.
+<StructureSection load='1lxn' size='340' side='right'caption='[[1lxn]], [[Resolution|resolution]] 2.30&Aring;' scene=''>
-You may change the PDB parameter (which sets the PDB file loaded into the applet)
+== Structural highlights ==
-or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+<table><tr><td colspan='2'>[[1lxn]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Methanothermobacter_thermautotrophicus Methanothermobacter thermautotrophicus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1LXN OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1LXN FirstGlance]. <br>
-or leave the SCENE parameter empty for the default display.
+</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.3&#8491;</td></tr>
--->
+<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
-{{STRUCTURE_1lxn|  PDB=1lxn  |  SCENE=  }}
+<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1lxn FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1lxn OCA], [https://pdbe.org/1lxn PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1lxn RCSB], [https://www.ebi.ac.uk/pdbsum/1lxn PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1lxn ProSAT], [https://www.topsan.org/Proteins/NESGC/1lxn TOPSAN]</span></td></tr>
+</table>
-===X-RAY STRUCTURE OF MTH1187 NORTHEAST STRUCTURAL GENOMICS CONSORTIUM TARGET TT272===
+== Function ==
+[https://www.uniprot.org/uniprot/Y1187_METTH Y1187_METTH]
+== Evolutionary Conservation ==
-==About this Structure==
+[[Image:Consurf_key_small.gif|200px|right]]
-LXN is a 4 chains structure of sequences from [http://en.wikipedia.org/wiki/Methanothermobacter_thermautotrophicus Methanothermobacter thermautotrophicus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1LXN OCA].
+Check<jmol>
+  <jmolCheckbox>
-==Reference==
+    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/lx/1lxn_consurf.spt"</scriptWhenChecked>
-Crystal structures of MTH1187 and its yeast ortholog YBL001c., Tao X, Khayat R, Christendat D, Savchenko A, Xu X, Goldsmith-Fischman S, Honig B, Edwards A, Arrowsmith CH, Tong L, Proteins. 2003 Aug 15;52(3):478-80. PMID:[http://www.ncbi.nlm.nih.gov/pubmed/12866058 12866058]
+    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
+    <text>to colour the structure by Evolutionary Conservation</text>
+  </jmolCheckbox>
+</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1lxn ConSurf].
+<div style="clear:both"></div>
+__TOC__
+</StructureSection>
+[[Category: Large Structures]]
 [[Category: Methanothermobacter thermautotrophicus]]
-[[Category: Arrowsmith, C H.]]
+[[Category: Arrowsmith CH]]
-[[Category: Christendat, D.]]
+[[Category: Christendat D]]
-[[Category: Edwards, A.]]
+[[Category: Edwards A]]
-[[Category: Khayat, R.]]
+[[Category: Khayat R]]
-[[Category: NESG, Northeast Structural Genomics Consortium.]]
+[[Category: Savchenko A]]
-[[Category: Savchenko, A.]]
+[[Category: Tao X]]
-[[Category: Tao, X.]]
+[[Category: Tong L]]
-[[Category: Tong, L.]]
+[[Category: Xu X]]
-[[Category: Xu, X.]]
-[[Category: Hypothetical structure]]
-[[Category: Nesg]]
-[[Category: Northeast structural genomics consortium]]
-[[Category: Protein structure initiative]]
-[[Category: Psi]]
-[[Category: Structural genomic]]
-''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sun Nov 16 18:10:50 2008''