3epr: Difference between revisions

From Proteopedia
Jump to navigation Jump to search
← Older edit
No edit summary
No edit summary
 
(6 intermediate revisions by the same user not shown)
Line 1: Line 1:
{{Seed}}
[[Image:3epr.png|left|200px]]


<!--
==Crystal structure of putative HAD superfamily hydrolase from Streptococcus agalactiae.==
The line below this paragraph, containing "STRUCTURE_3epr", creates the "Structure Box" on the page.
<StructureSection load='3epr' size='340' side='right'caption='[[3epr]], [[Resolution|resolution]] 1.55&Aring;' scene=''>
You may change the PDB parameter (which sets the PDB file loaded into the applet)
== Structural highlights ==
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
<table><tr><td colspan='2'>[[3epr]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Streptococcus_agalactiae_serogroup_V Streptococcus agalactiae serogroup V]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3EPR OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3EPR FirstGlance]. <br>
or leave the SCENE parameter empty for the default display.
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.55&#8491;</td></tr>
-->
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=NA:SODIUM+ION'>NA</scene></td></tr>
{{STRUCTURE_3epr|  PDB=3epr  |  SCENE=  }}
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3epr FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3epr OCA], [https://pdbe.org/3epr PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3epr RCSB], [https://www.ebi.ac.uk/pdbsum/3epr PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3epr ProSAT], [https://www.topsan.org/Proteins/NYSGXRC/3epr TOPSAN]</span></td></tr>
 
</table>
===Crystal structure of putative HAD superfamily hydrolase from Streptococcus agalactiae.===
== Function ==
 
[https://www.uniprot.org/uniprot/Q8E044_STRA5 Q8E044_STRA5]  
 
== Evolutionary Conservation ==
==About this Structure==
[[Image:Consurf_key_small.gif|200px|right]]
3EPR is a 1 chain structure of sequence from [http://en.wikipedia.org/wiki/Streptococcus_agalactiae_serogroup_v Streptococcus agalactiae serogroup v]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3EPR OCA].  
Check<jmol>
[[Category: Streptococcus agalactiae serogroup v]]
  <jmolCheckbox>
[[Category: Almo, S C.]]
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ep/3epr_consurf.spt"</scriptWhenChecked>
[[Category: Burley, S K.]]
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
[[Category: Dickey, M.]]
    <text>to colour the structure by Evolutionary Conservation</text>
[[Category: Groshong, C.]]
  </jmolCheckbox>
[[Category: NYSGXRC, New York SGX Research Center for Structural Genomics.]]
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3epr ConSurf].
[[Category: Ramagopal, U A.]]
<div style="clear:both"></div>
[[Category: Rodgers, L.]]
__TOC__
[[Category: Tang, B K.]]
</StructureSection>
[[Category: Toro, R.]]
[[Category: Large Structures]]
[[Category: Had superfamily hydrolase.]]
[[Category: Streptococcus agalactiae serogroup V]]
[[Category: New york sgx research center for structural genomic]]
[[Category: Almo SC]]
[[Category: Nysgxrc]]
[[Category: Burley SK]]
[[Category: Protein structure initiative]]
[[Category: Dickey M]]
[[Category: Psi-2]]
[[Category: Groshong C]]
[[Category: Structural genomic]]
[[Category: Ramagopal UA]]
[[Category: Unknown function]]
[[Category: Rodgers L]]
 
[[Category: Tang BK]]
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sun Nov 16 18:08:05 2008''
[[Category: Toro R]]

Latest revision as of 12:48, 21 February 2024

Crystal structure of putative HAD superfamily hydrolase from Streptococcus agalactiae.Crystal structure of putative HAD superfamily hydrolase from Streptococcus agalactiae.

Structural highlights

3epr is a 1 chain structure with sequence from Streptococcus agalactiae serogroup V. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Method:X-ray diffraction, Resolution 1.55Å
Ligands:,
Resources:FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT, TOPSAN

Function

Q8E044_STRA5

Evolutionary Conservation

Check, as determined by ConSurfDB. You may read the explanation of the method and the full data available from ConSurf.

3epr, resolution 1.55Å

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)Proteopedia Page Contributors and Editors (what is this?)

OCA
Retrieved from "https://proteopedia.openfox.io/wiki/index.php?title=3epr&oldid=4064656"