2qrr: Difference between revisions

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{{Seed}}
[[Image:2qrr.png|left|200px]]


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==Crystal structure of the soluble domain of the ABC transporter, ATP-binding protein from Vibrio parahaemolyticus==
The line below this paragraph, containing "STRUCTURE_2qrr", creates the "Structure Box" on the page.
<StructureSection load='2qrr' size='340' side='right'caption='[[2qrr]], [[Resolution|resolution]] 1.71&Aring;' scene=''>
You may change the PDB parameter (which sets the PDB file loaded into the applet)  
== Structural highlights ==
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
<table><tr><td colspan='2'>[[2qrr]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Vibpa Vibpa]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2QRR OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2QRR FirstGlance]. <br>
or leave the SCENE parameter empty for the default display.
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene></td></tr>
-->
<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
{{STRUCTURE_2qrr| PDB=2qrr |  SCENE= }}
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">metN, VP0706 ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=223926 VIBPA])</td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2qrr FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2qrr OCA], [https://pdbe.org/2qrr PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2qrr RCSB], [https://www.ebi.ac.uk/pdbsum/2qrr PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2qrr ProSAT], [https://www.topsan.org/Proteins/MCSG/2qrr TOPSAN]</span></td></tr>
</table>
== Function ==
[[https://www.uniprot.org/uniprot/METN_VIBPA METN_VIBPA]] Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system (By similarity).
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
Check<jmol>
  <jmolCheckbox>
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/qr/2qrr_consurf.spt"</scriptWhenChecked>
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
    <text>to colour the structure by Evolutionary Conservation</text>
  </jmolCheckbox>
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2qrr ConSurf].
<div style="clear:both"></div>


===Crystal structure of the soluble domain of the ABC transporter, ATP-binding protein from Vibrio parahaemolyticus===
==See Also==
 
*[[ABC transporter 3D structures|ABC transporter 3D structures]]
 
*[[Endonuclease 3D structures|Endonuclease 3D structures]]
==About this Structure==
__TOC__
2QRR is a 2 chains structure of sequences from [http://en.wikipedia.org/wiki/Vibrio_parahaemolyticus_rimd_2210633 Vibrio parahaemolyticus rimd 2210633]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2QRR OCA].
</StructureSection>
[[Category: Vibrio parahaemolyticus rimd 2210633]]
[[Category: Large Structures]]
[[Category: Freeman, L.]]
[[Category: Vibpa]]
[[Category: Joachimiak, A.]]
[[Category: Freeman, L]]
[[Category: Kim, Y.]]
[[Category: Joachimiak, A]]
[[Category: MCSG, Midwest Center for Structural Genomics.]]
[[Category: Kim, Y]]
[[Category: Zhou, M.]]
[[Category: Structural genomic]]
[[Category: Zhou, M]]
[[Category: Alpha-beta structure]]
[[Category: Alpha-beta structure]]
[[Category: Amino-acid transport]]
[[Category: Amino-acid transport]]
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[[Category: Mcsg]]
[[Category: Mcsg]]
[[Category: Membrane]]
[[Category: Membrane]]
[[Category: Midwest center for structural genomic]]
[[Category: Nucleotide-binding]]
[[Category: Nucleotide-binding]]
[[Category: Protein structure initiative]]
[[Category: PSI, Protein structure initiative]]
[[Category: Psi-2]]
[[Category: Structural genomic]]
[[Category: Transport]]
[[Category: Transport]]
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sun Nov 16 16:33:38 2008''

Latest revision as of 11:31, 25 June 2021

Crystal structure of the soluble domain of the ABC transporter, ATP-binding protein from Vibrio parahaemolyticusCrystal structure of the soluble domain of the ABC transporter, ATP-binding protein from Vibrio parahaemolyticus

Structural highlights

2qrr is a 2 chain structure with sequence from Vibpa. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Ligands:
NonStd Res:
Gene:metN, VP0706 (VIBPA)
Resources:FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT, TOPSAN

Function

[METN_VIBPA] Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system (By similarity).

Evolutionary Conservation

Check, as determined by ConSurfDB. You may read the explanation of the method and the full data available from ConSurf.

See Also

2qrr, resolution 1.71Å

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