3dxp: Difference between revisions

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{{Seed}}
[[Image:3dxp.png|left|200px]]


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==Crystal structure of a putative aminoglycoside phosphotransferase (reut_a1007) from ralstonia eutropha jmp134 at 2.32 A resolution==
The line below this paragraph, containing "STRUCTURE_3dxp", creates the "Structure Box" on the page.
<StructureSection load='3dxp' size='340' side='right'caption='[[3dxp]], [[Resolution|resolution]] 2.32&Aring;' scene=''>
You may change the PDB parameter (which sets the PDB file loaded into the applet)
== Structural highlights ==
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
<table><tr><td colspan='2'>[[3dxp]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Cupriavidus_pinatubonensis_JMP134 Cupriavidus pinatubonensis JMP134]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3DXP OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3DXP FirstGlance]. <br>
or leave the SCENE parameter empty for the default display.
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ACT:ACETATE+ION'>ACT</scene>, <scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
-->
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3dxp FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3dxp OCA], [https://pdbe.org/3dxp PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3dxp RCSB], [https://www.ebi.ac.uk/pdbsum/3dxp PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3dxp ProSAT], [https://www.topsan.org/Proteins/JCSG/3dxp TOPSAN]</span></td></tr>
{{STRUCTURE_3dxp|  PDB=3dxp  |  SCENE=  }}
</table>
 
== Function ==
===Crystal structure of putative acyl-CoA dehydrogenase (YP_295230.1) from RALSTONIA EUTROPHA JMP134 at 2.32 A resolution===
[https://www.uniprot.org/uniprot/Q473P7_CUPPJ Q473P7_CUPPJ]  
 
== Evolutionary Conservation ==
 
[[Image:Consurf_key_small.gif|200px|right]]
==About this Structure==
Check<jmol>
3DXP is a 1 chain structure of sequence from [http://en.wikipedia.org/wiki/Ralstonia_eutropha_jmp134 Ralstonia eutropha jmp134]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3DXP OCA].  
  <jmolCheckbox>
[[Category: Ralstonia eutropha jmp134]]
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/dx/3dxp_consurf.spt"</scriptWhenChecked>
[[Category: JCSG, Joint Center for Structural Genomics.]]
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
[[Category: Jcsg]]
    <text>to colour the structure by Evolutionary Conservation</text>
[[Category: Joint center for structural genomic]]
  </jmolCheckbox>
[[Category: Protein structure initiative]]
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3dxp ConSurf].
[[Category: Psi-2]]
<div style="clear:both"></div>
[[Category: Putative acyl-coa dehydrogenase]]
__TOC__
[[Category: Structural genomic]]
</StructureSection>
[[Category: Transferase]]
[[Category: Cupriavidus pinatubonensis JMP134]]
[[Category: Unknown function]]
[[Category: Large Structures]]
[[Category: Yp_295230 1]]
 
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sun Nov 16 16:08:32 2008''

Latest revision as of 14:33, 1 February 2023

Crystal structure of a putative aminoglycoside phosphotransferase (reut_a1007) from ralstonia eutropha jmp134 at 2.32 A resolutionCrystal structure of a putative aminoglycoside phosphotransferase (reut_a1007) from ralstonia eutropha jmp134 at 2.32 A resolution

Structural highlights

3dxp is a 1 chain structure with sequence from Cupriavidus pinatubonensis JMP134. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Ligands:, , ,
Resources:FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT, TOPSAN

Function

Q473P7_CUPPJ

Evolutionary Conservation

Check, as determined by ConSurfDB. You may read the explanation of the method and the full data available from ConSurf.

3dxp, resolution 2.32Å

Drag the structure with the mouse to rotate

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OCA
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