3bma: Difference between revisions

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[[Image:3bma.png|left|200px]]


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==Crystal structure of D-alanyl-lipoteichoic acid synthetase from Streptococcus pneumoniae R6==
The line below this paragraph, containing "STRUCTURE_3bma", creates the "Structure Box" on the page.
<StructureSection load='3bma' size='340' side='right'caption='[[3bma]], [[Resolution|resolution]] 2.24&Aring;' scene=''>
You may change the PDB parameter (which sets the PDB file loaded into the applet)
== Structural highlights ==
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
<table><tr><td colspan='2'>[[3bma]] is a 6 chain structure with sequence from [https://en.wikipedia.org/wiki/Streptococcus_pneumoniae_R6 Streptococcus pneumoniae R6]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3BMA OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3BMA FirstGlance]. <br>
or leave the SCENE parameter empty for the default display.
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.24&#8491;</td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
{{STRUCTURE_3bma|  PDB=3bma  |  SCENE=  }}
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3bma FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3bma OCA], [https://pdbe.org/3bma PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3bma RCSB], [https://www.ebi.ac.uk/pdbsum/3bma PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3bma ProSAT], [https://www.topsan.org/Proteins/NYSGXRC/3bma TOPSAN]</span></td></tr>
 
</table>
===Crystal structure of D-alanyl-lipoteichoic acid synthetase from Streptococcus pneumoniae R6===
== Function ==
 
[https://www.uniprot.org/uniprot/Q8DN13_STRR6 Q8DN13_STRR6]  
 
== Evolutionary Conservation ==
==About this Structure==
[[Image:Consurf_key_small.gif|200px|right]]
3BMA is a 6 chains structure of sequences from [http://en.wikipedia.org/wiki/Streptococcus_pneumoniae_r6 Streptococcus pneumoniae r6]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3BMA OCA].  
Check<jmol>
[[Category: Streptococcus pneumoniae r6]]
  <jmolCheckbox>
[[Category: Almo, S C.]]
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/bm/3bma_consurf.spt"</scriptWhenChecked>
[[Category: Bain, K.]]
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
[[Category: Bonanno, J B.]]
    <text>to colour the structure by Evolutionary Conservation</text>
[[Category: Burley, S K.]]
  </jmolCheckbox>
[[Category: Gheyi, T.]]
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3bma ConSurf].
[[Category: Iizuka, M.]]
<div style="clear:both"></div>
[[Category: Koss, J.]]
__TOC__
[[Category: NYSGXRC, New York Structural GenomiX Research Consortium.]]
</StructureSection>
[[Category: Patskovsky, Y.]]
[[Category: Large Structures]]
[[Category: Rutter, M.]]
[[Category: Streptococcus pneumoniae R6]]
[[Category: Sauder, J M.]]
[[Category: Almo SC]]
[[Category: Smith, D.]]
[[Category: Bain K]]
[[Category: Sridhar, V.]]
[[Category: Bonanno JB]]
[[Category: Wasserman, S R.]]
[[Category: Burley SK]]
[[Category: D-alanyl-lipoteichoic acid biosynthesis]]
[[Category: Gheyi T]]
[[Category: Ligase]]
[[Category: Iizuka M]]
[[Category: New york structural genomix research consortium]]
[[Category: Koss J]]
[[Category: Nysgxrc]]
[[Category: Patskovsky Y]]
[[Category: Protein structure initiative]]
[[Category: Rutter M]]
[[Category: Psi-2]]
[[Category: Sauder JM]]
[[Category: Structural genomic]]
[[Category: Smith D]]
 
[[Category: Sridhar V]]
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sun Nov 16 12:04:06 2008''
[[Category: Wasserman SR]]

Latest revision as of 12:29, 21 February 2024

Crystal structure of D-alanyl-lipoteichoic acid synthetase from Streptococcus pneumoniae R6Crystal structure of D-alanyl-lipoteichoic acid synthetase from Streptococcus pneumoniae R6

Structural highlights

3bma is a 6 chain structure with sequence from Streptococcus pneumoniae R6. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Method:X-ray diffraction, Resolution 2.24Å
Ligands:,
Resources:FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT, TOPSAN

Function

Q8DN13_STRR6

Evolutionary Conservation

Check, as determined by ConSurfDB. You may read the explanation of the method and the full data available from ConSurf.

3bma, resolution 2.24Å

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)Proteopedia Page Contributors and Editors (what is this?)

OCA
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