2ark: Difference between revisions

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{{Seed}}
[[Image:2ark.png|left|200px]]


<!--
==Structure of a flavodoxin from Aquifex aeolicus==
The line below this paragraph, containing "STRUCTURE_2ark", creates the "Structure Box" on the page.
<StructureSection load='2ark' size='340' side='right'caption='[[2ark]], [[Resolution|resolution]] 2.40&Aring;' scene=''>
You may change the PDB parameter (which sets the PDB file loaded into the applet)  
== Structural highlights ==
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
<table><tr><td colspan='2'>[[2ark]] is a 6 chain structure with sequence from [https://en.wikipedia.org/wiki/Aquifex_aeolicus Aquifex aeolicus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2ARK OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2ARK FirstGlance]. <br>
or leave the SCENE parameter empty for the default display.
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.4&#8491;</td></tr>
-->
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene>, <scene name='pdbligand=PO4:PHOSPHATE+ION'>PO4</scene></td></tr>
{{STRUCTURE_2ark| PDB=2ark |  SCENE= }}
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2ark FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2ark OCA], [https://pdbe.org/2ark PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2ark RCSB], [https://www.ebi.ac.uk/pdbsum/2ark PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2ark ProSAT], [https://www.topsan.org/Proteins/MCSG/2ark TOPSAN]</span></td></tr>
</table>
== Function ==
[https://www.uniprot.org/uniprot/FLAV_AQUAE FLAV_AQUAE] Low-potential electron donor to a number of redox enzymes (By similarity).
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
Check<jmol>
  <jmolCheckbox>
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ar/2ark_consurf.spt"</scriptWhenChecked>
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
    <text>to colour the structure by Evolutionary Conservation</text>
  </jmolCheckbox>
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2ark ConSurf].
<div style="clear:both"></div>


===Structure of a flavodoxin from Aquifex aeolicus===
==See Also==
 
*[[Flavodoxin 3D structures|Flavodoxin 3D structures]]
 
__TOC__
==About this Structure==
</StructureSection>
2ARK is a 6 chains structure of sequences from [http://en.wikipedia.org/wiki/Aquifex_aeolicus Aquifex aeolicus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2ARK OCA].
[[Category: Aquifex aeolicus]]
[[Category: Cuff, M E.]]
[[Category: Cymborowski, M.]]
[[Category: Joachimiak, A.]]
[[Category: MCSG, Midwest Center for Structural Genomics.]]
[[Category: Minor, W.]]
[[Category: Quartey, P.]]
[[Category: Zhou, M.]]
[[Category: Aquifex aeolicus]]
[[Category: Aquifex aeolicus]]
[[Category: Flavodoxin]]
[[Category: Large Structures]]
[[Category: Fmn]]
[[Category: Cuff ME]]
[[Category: Mcsg]]
[[Category: Cymborowski M]]
[[Category: Midwest center for structural genomic]]
[[Category: Joachimiak A]]
[[Category: Protein structure initiative]]
[[Category: Minor W]]
[[Category: Psi]]
[[Category: Quartey P]]
[[Category: Structural genomic]]
[[Category: Zhou M]]
 
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sun Nov 16 11:58:31 2008''

Latest revision as of 14:17, 22 May 2024

Structure of a flavodoxin from Aquifex aeolicusStructure of a flavodoxin from Aquifex aeolicus

Structural highlights

2ark is a 6 chain structure with sequence from Aquifex aeolicus. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Method:X-ray diffraction, Resolution 2.4Å
Ligands:, ,
Resources:FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT, TOPSAN

Function

FLAV_AQUAE Low-potential electron donor to a number of redox enzymes (By similarity).

Evolutionary Conservation

Check, as determined by ConSurfDB. You may read the explanation of the method and the full data available from ConSurf.

See Also

2ark, resolution 2.40Å

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OCA
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