3dca: Difference between revisions

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[[Image:3dca.png|left|200px]]


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==Crystal structure of the RPA0582- protein of unknown function from Rhodopseudomonas palustris- a structural genomics target==
The line below this paragraph, containing "STRUCTURE_3dca", creates the "Structure Box" on the page.
<StructureSection load='3dca' size='340' side='right'caption='[[3dca]], [[Resolution|resolution]] 3.35&Aring;' scene=''>
You may change the PDB parameter (which sets the PDB file loaded into the applet)
== Structural highlights ==
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
<table><tr><td colspan='2'>[[3dca]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Rhodopseudomonas_palustris Rhodopseudomonas palustris]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3DCA OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3DCA FirstGlance]. <br>
or leave the SCENE parameter empty for the default display.
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 3.35&#8491;</td></tr>
-->
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
{{STRUCTURE_3dca|  PDB=3dca  |  SCENE=  }}
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3dca FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3dca OCA], [https://pdbe.org/3dca PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3dca RCSB], [https://www.ebi.ac.uk/pdbsum/3dca PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3dca ProSAT], [https://www.topsan.org/Proteins/MCSG/3dca TOPSAN]</span></td></tr>
 
</table>
===Crystal structure of the RPA0582- protein of unknown function from Rhodopseudomonas palustris- a structural genomics target===
== Function ==
 
[https://www.uniprot.org/uniprot/Q6NC90_RHOPA Q6NC90_RHOPA]
 
== Evolutionary Conservation ==
==About this Structure==
[[Image:Consurf_key_small.gif|200px|right]]
3DCA is a 4 chains structure of sequences from [http://en.wikipedia.org/wiki/Rhodopseudomonas_palustris Rhodopseudomonas palustris]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3DCA OCA].  
Check<jmol>
  <jmolCheckbox>
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/dc/3dca_consurf.spt"</scriptWhenChecked>
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
    <text>to colour the structure by Evolutionary Conservation</text>
  </jmolCheckbox>
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3dca ConSurf].
<div style="clear:both"></div>
__TOC__
</StructureSection>
[[Category: Large Structures]]
[[Category: Rhodopseudomonas palustris]]
[[Category: Rhodopseudomonas palustris]]
[[Category: Chruszcz, M.]]
[[Category: Chruszcz M]]
[[Category: Edwards, A.]]
[[Category: Edwards A]]
[[Category: Evdokimova, E.]]
[[Category: Evdokimova E]]
[[Category: Joachimiak, A.]]
[[Category: Joachimiak A]]
[[Category: Kudritska, M.]]
[[Category: Kudritska M]]
[[Category: MCSG, Midwest Center for Structural Genomics.]]
[[Category: Minor W]]
[[Category: Minor, W.]]
[[Category: Savchenko A]]
[[Category: Savchenko, A.]]
[[Category: Sledz P]]
[[Category: Sledz, P.]]
[[Category: Turk D]]
[[Category: Turk, D.]]
[[Category: Wang S]]
[[Category: Wang, S.]]
[[Category: Yim V]]
[[Category: Yim, V.]]
[[Category: Alpha-beta-barrel]]
[[Category: Mcsg]]
[[Category: Midwest center for structural genomic]]
[[Category: Protein structure initiative]]
[[Category: Psi-2]]
[[Category: Sad]]
[[Category: Structural genomic]]
[[Category: Unknown function]]
 
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sun Nov 16 11:44:47 2008''

Latest revision as of 11:58, 30 October 2024

Crystal structure of the RPA0582- protein of unknown function from Rhodopseudomonas palustris- a structural genomics targetCrystal structure of the RPA0582- protein of unknown function from Rhodopseudomonas palustris- a structural genomics target

Structural highlights

3dca is a 4 chain structure with sequence from Rhodopseudomonas palustris. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Method:X-ray diffraction, Resolution 3.35Å
Ligands:,
Resources:FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT, TOPSAN

Function

Q6NC90_RHOPA

Evolutionary Conservation

Check, as determined by ConSurfDB. You may read the explanation of the method and the full data available from ConSurf.

3dca, resolution 3.35Å

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)Proteopedia Page Contributors and Editors (what is this?)

OCA
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