1s5u: Difference between revisions

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-{{Seed}}
-[[Image:1s5u.png|left|200px]]
-<!--
+==Crystal Structure of Hypothetical Protein EC709 from Escherichia coli==
-The line below this paragraph, containing "STRUCTURE_1s5u", creates the "Structure Box" on the page.
+<StructureSection load='1s5u' size='340' side='right'caption='[[1s5u]], [[Resolution|resolution]] 1.70&Aring;' scene=''>
-You may change the PDB parameter (which sets the PDB file loaded into the applet)
+== Structural highlights ==
-or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+<table><tr><td colspan='2'>[[1s5u]] is a 8 chain structure with sequence from [https://en.wikipedia.org/wiki/Escherichia_coli Escherichia coli]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1S5U OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1S5U FirstGlance]. <br>
-or leave the SCENE parameter empty for the default display.
+</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.7&#8491;</td></tr>
--->
+<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
-{{STRUCTURE_1s5u|  PDB=1s5u  |  SCENE=  }}
+<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1s5u FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1s5u OCA], [https://pdbe.org/1s5u PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1s5u RCSB], [https://www.ebi.ac.uk/pdbsum/1s5u PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1s5u ProSAT], [https://www.topsan.org/Proteins/MCSG/1s5u TOPSAN]</span></td></tr>
+</table>
-===Crystal Structure of Hypothetical Protein EC709 from Escherichia coli===
+== Function ==
+[https://www.uniprot.org/uniprot/YBGC_ECOLI YBGC_ECOLI] Thioesterase that appears to be involved in phospholipid metabolism. Some specific acyl-ACPs could be physiological substrates. Displays acyl-CoA thioesterase activity on malonyl-CoA in vitro, catalyzing the hydrolysis of the thioester bond.
+== Evolutionary Conservation ==
-==About this Structure==
+[[Image:Consurf_key_small.gif|200px|right]]
-S5U is a 8 chains structure of sequences from [http://en.wikipedia.org/wiki/Escherichia_coli Escherichia coli]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1S5U OCA].
+Check<jmol>
+  <jmolCheckbox>
+    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/s5/1s5u_consurf.spt"</scriptWhenChecked>
+    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
+    <text>to colour the structure by Evolutionary Conservation</text>
+  </jmolCheckbox>
+</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1s5u ConSurf].
+<div style="clear:both"></div>
+__TOC__
+</StructureSection>
 [[Category: Escherichia coli]]
-[[Category: Edwards, A.]]
+[[Category: Large Structures]]
-[[Category: Joachimiak, A.]]
+[[Category: Edwards A]]
-[[Category: Kim, Y.]]
+[[Category: Joachimiak A]]
-[[Category: MCSG, Midwest Center for Structural Genomics.]]
+[[Category: Kim Y]]
-[[Category: Savchenko, A.]]
+[[Category: Savchenko A]]
-[[Category: Skarina, T.]]
+[[Category: Skarina T]]
-[[Category: Hypothetical protein]]
-[[Category: Mcsg]]
-[[Category: Midwest center for structural genomic]]
-[[Category: Protein structure initiative]]
-[[Category: Psi]]
-[[Category: Structural genomic]]
-[[Category: Thioesterase fold]]
-''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sun Nov 16 10:13:16 2008''