1hee: Difference between revisions

From Proteopedia
Jump to navigation Jump to search
New page: left|200px<br /> <applet load="1hee" size="450" color="white" frame="true" align="right" spinBox="true" caption="1hee, resolution 1.75Å" /> '''CRYSTAL STRUCTURE O...
 
No edit summary
 
(22 intermediate revisions by the same user not shown)
Line 1: Line 1:
[[Image:1hee.gif|left|200px]]<br />
<applet load="1hee" size="450" color="white" frame="true" align="right" spinBox="true"
caption="1hee, resolution 1.75&Aring;" />
'''CRYSTAL STRUCTURE OF BOVINE PANCREATIC CARBOXYPEPTIDASE A COMPLEXED WITH L-N-HYDROXYAMINOCARBONYL PHENYLALANINE AT 2.3 A'''<br />


==Overview==
==Crystal structure of bovine pancreatic carboxypeptidase A complexed with L-N-hydroxyaminocarbonyl phenylalanine at 2.3 A==
Both D- and L-isomers of N-(hydroxyaminocarbonyl)phenylalanine () were, shown to have strong binding affinity towards carboxypeptidase A (CPA), with D- being more potent than its enantiomer by 3-fold (Chung, S. J.;, Kim, D. H. Bioorg. Med. Chem. 2001, 9, 185.). In order to understand the, reversed stereochemical preference shown in the CPA inhibition, we have, solved the crystal structures of CPA complexed with each enantiometer of, up to 1.75 A resolution. Inhibitor L- whose stereochemistry belongs to the, stereochemical series of substrate binds CPA like substrate does with its, carbonyl oxygen coordinating to the active site zinc ion. Its hydroxyl is, engaged in hydrogen bonding with the carboxylate of Glu-270. On the other, hand, in binding of D- to CPA, its terminal hydroxyl group is ... [[http://ispc.weizmann.ac.il/pmbin/getpm?11937361 (full description)]]
<StructureSection load='1hee' size='340' side='right'caption='[[1hee]], [[Resolution|resolution]] 1.75&Aring;' scene=''>
== Structural highlights ==
<table><tr><td colspan='2'>[[1hee]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Bos_taurus Bos taurus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1HEE OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1HEE FirstGlance]. <br>
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.75&#8491;</td></tr>
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=LHY:L-[(N-HYDROXYAMINO)CARBONYL]PHENYLALANINE'>LHY</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1hee FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1hee OCA], [https://pdbe.org/1hee PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1hee RCSB], [https://www.ebi.ac.uk/pdbsum/1hee PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1hee ProSAT]</span></td></tr>
</table>
== Function ==
[https://www.uniprot.org/uniprot/CBPA1_BOVIN CBPA1_BOVIN] Carboxypeptidase that catalyzes the release of a C-terminal amino acid, but has little or no action with -Asp, -Glu, -Arg, -Lys or -Pro (By similarity).
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
Check<jmol>
  <jmolCheckbox>
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/he/1hee_consurf.spt"</scriptWhenChecked>
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
    <text>to colour the structure by Evolutionary Conservation</text>
  </jmolCheckbox>
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1hee ConSurf].
<div style="clear:both"></div>


==About this Structure==
==See Also==
1HEE is a [[http://en.wikipedia.org/wiki/Single_protein Single protein]] structure of sequence from [[http://en.wikipedia.org/wiki/Bos_taurus Bos taurus]] with ZN and LHY as [[http://en.wikipedia.org/wiki/ligands ligands]]. Active as [[http://en.wikipedia.org/wiki/ ]], with EC number [[http://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.4.17.1 3.4.17.1]]. Full crystallographic information is available from [[http://ispc.weizmann.ac.il/oca-bin/ocashort?id=1HEE OCA]].
*[[Carboxypeptidase 3D structures|Carboxypeptidase 3D structures]]
 
__TOC__
==Reference==
</StructureSection>
Insight into the stereochemistry in the inhibition of carboxypeptidase A with N-(hydroxyaminocarbonyl)phenylalanine: binding modes of an enantiomeric pair of the inhibitor to carboxypeptidase A., Cho JH, Kim DH, Chung SJ, Ha NC, Oh BH, Yong Choi K, Bioorg Med Chem. 2002 Jun;10(6):2015-22. PMID:[http://ispc.weizmann.ac.il//pmbin/getpm?pmid=11937361 11937361]
[[Category: Bos taurus]]
[[Category: Bos taurus]]
[[Category: Single protein]]
[[Category: Large Structures]]
[[Category: Cho, J.H.]]
[[Category: Cho JH]]
[[Category: Choi, K.Y.]]
[[Category: Choi KY]]
[[Category: Chung, S.J.]]
[[Category: Chung SJ]]
[[Category: Ha, N.C.]]
[[Category: Ha N-C]]
[[Category: Kim, D.H.]]
[[Category: Kim DH]]
[[Category: Oh, B.H.]]
[[Category: Oh B-H]]
[[Category: LHY]]
[[Category: ZN]]
[[Category: cpa]]
[[Category: inhibitor]]
[[Category: lbhb]]
 
''Page seeded by [http://ispc.weizmann.ac.il/oca OCA ] on Mon Oct 29 21:04:16 2007''

Latest revision as of 14:30, 27 March 2024

Crystal structure of bovine pancreatic carboxypeptidase A complexed with L-N-hydroxyaminocarbonyl phenylalanine at 2.3 ACrystal structure of bovine pancreatic carboxypeptidase A complexed with L-N-hydroxyaminocarbonyl phenylalanine at 2.3 A

Structural highlights

1hee is a 4 chain structure with sequence from Bos taurus. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Method:X-ray diffraction, Resolution 1.75Å
Ligands:,
Resources:FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT

Function

CBPA1_BOVIN Carboxypeptidase that catalyzes the release of a C-terminal amino acid, but has little or no action with -Asp, -Glu, -Arg, -Lys or -Pro (By similarity).

Evolutionary Conservation

Check, as determined by ConSurfDB. You may read the explanation of the method and the full data available from ConSurf.

See Also

1hee, resolution 1.75Å

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)Proteopedia Page Contributors and Editors (what is this?)

OCA
Retrieved from "https://proteopedia.openfox.io/wiki/index.php?title=1hee&oldid=4115193"