2p9j: Difference between revisions

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[[Image:2p9j.png|left|200px]]


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==Crystal structure of AQ2171 from Aquifex aeolicus==
The line below this paragraph, containing "STRUCTURE_2p9j", creates the "Structure Box" on the page.
<StructureSection load='2p9j' size='340' side='right'caption='[[2p9j]], [[Resolution|resolution]] 2.40&Aring;' scene=''>
You may change the PDB parameter (which sets the PDB file loaded into the applet)
== Structural highlights ==
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
<table><tr><td colspan='2'>[[2p9j]] is a 8 chain structure with sequence from [https://en.wikipedia.org/wiki/Aquifex_aeolicus_VF5 Aquifex aeolicus VF5]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2P9J OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2P9J FirstGlance]. <br>
or leave the SCENE parameter empty for the default display.
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.4&#8491;</td></tr>
-->
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
{{STRUCTURE_2p9j|  PDB=2p9j  |  SCENE=  }}
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2p9j FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2p9j OCA], [https://pdbe.org/2p9j PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2p9j RCSB], [https://www.ebi.ac.uk/pdbsum/2p9j PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2p9j ProSAT], [https://www.topsan.org/Proteins/RSGI/2p9j TOPSAN]</span></td></tr>
 
</table>
===Crystal structure of AQ2171 from Aquifex aeolicus===
== Function ==
 
[https://www.uniprot.org/uniprot/O67920_AQUAE O67920_AQUAE]  
 
== Evolutionary Conservation ==
==About this Structure==
[[Image:Consurf_key_small.gif|200px|right]]
2P9J is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Aquifex_aeolicus Aquifex aeolicus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2P9J OCA].  
Check<jmol>
[[Category: Aquifex aeolicus]]
  <jmolCheckbox>
[[Category: Single protein]]
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/p9/2p9j_consurf.spt"</scriptWhenChecked>
[[Category: Agari, Y.]]
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
[[Category: Chen, L.]]
    <text>to colour the structure by Evolutionary Conservation</text>
[[Category: Ebihara, A.]]
  </jmolCheckbox>
[[Category: Kuramitsu, S.]]
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2p9j ConSurf].
[[Category: RSGI, RIKEN Structural Genomics/Proteomics Initiative.]]
<div style="clear:both"></div>
[[Category: Rose, J P.]]
__TOC__
[[Category: SECSG, Southeast Collaboratory for Structural Genomics.]]
</StructureSection>
[[Category: Shinkai, A.]]
[[Category: Aquifex aeolicus VF5]]
[[Category: Wang, B-C.]]
[[Category: Large Structures]]
[[Category: Yang, H.]]
[[Category: Agari Y]]
[[Category: Yokoyama, S.]]
[[Category: Chen L]]
[[Category: Aq2171]]
[[Category: Ebihara A]]
[[Category: Aquifex aeolicus]]
[[Category: Kuramitsu S]]
[[Category: Protein structure initiative]]
[[Category: Rose JP]]
[[Category: Psi]]
[[Category: Shinkai A]]
[[Category: Riken]]
[[Category: Wang B-C]]
[[Category: Riken structural genomics/proteomics initiative]]
[[Category: Yang H]]
[[Category: Rsgi]]
[[Category: Yokoyama S]]
[[Category: Secsg]]
[[Category: Southeast collaboratory for structural genomic]]
[[Category: Structural genomic]]
 
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Mon Sep 29 03:31:07 2008''

Latest revision as of 11:27, 30 October 2024

Crystal structure of AQ2171 from Aquifex aeolicusCrystal structure of AQ2171 from Aquifex aeolicus

Structural highlights

2p9j is a 8 chain structure with sequence from Aquifex aeolicus VF5. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Method:X-ray diffraction, Resolution 2.4Å
Ligands:
Resources:FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT, TOPSAN

Function

O67920_AQUAE

Evolutionary Conservation

Check, as determined by ConSurfDB. You may read the explanation of the method and the full data available from ConSurf.

2p9j, resolution 2.40Å

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)Proteopedia Page Contributors and Editors (what is this?)

OCA
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