2cz4: Difference between revisions

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[[Image:2cz4.png|left|200px]]


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==Crystal structure of a putative PII-like signaling protein (TTHA0516) from Thermus thermophilus HB8==
The line below this paragraph, containing "STRUCTURE_2cz4", creates the "Structure Box" on the page.
<StructureSection load='2cz4' size='340' side='right'caption='[[2cz4]], [[Resolution|resolution]] 1.93&Aring;' scene=''>
You may change the PDB parameter (which sets the PDB file loaded into the applet)
== Structural highlights ==
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
<table><tr><td colspan='2'>[[2cz4]] is a 3 chain structure with sequence from [https://en.wikipedia.org/wiki/Thermus_thermophilus_HB8 Thermus thermophilus HB8]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2CZ4 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2CZ4 FirstGlance]. <br>
or leave the SCENE parameter empty for the default display.
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.93&#8491;</td></tr>
-->
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ACT:ACETATE+ION'>ACT</scene>, <scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
{{STRUCTURE_2cz4|  PDB=2cz4  |  SCENE=  }}
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2cz4 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2cz4 OCA], [https://pdbe.org/2cz4 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2cz4 RCSB], [https://www.ebi.ac.uk/pdbsum/2cz4 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2cz4 ProSAT], [https://www.topsan.org/Proteins/RSGI/2cz4 TOPSAN]</span></td></tr>
 
</table>
===Crystal structure of a putative PII-like signaling protein (TTHA0516) from Thermus thermophilus HB8===
== Function ==
 
[https://www.uniprot.org/uniprot/Q5SKX7_THET8 Q5SKX7_THET8]  
 
== Evolutionary Conservation ==
==About this Structure==
[[Image:Consurf_key_small.gif|200px|right]]
2CZ4 is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Thermus_thermophilus Thermus thermophilus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2CZ4 OCA].  
Check<jmol>
[[Category: Single protein]]
  <jmolCheckbox>
[[Category: Thermus thermophilus]]
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/cz/2cz4_consurf.spt"</scriptWhenChecked>
[[Category: Arai, R.]]
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
[[Category: Fusatomi, E.]]
    <text>to colour the structure by Evolutionary Conservation</text>
[[Category: Kawaguchi, S.]]
  </jmolCheckbox>
[[Category: Kukimoto-Niino, M.]]
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2cz4 ConSurf].
[[Category: RSGI, RIKEN Structural Genomics/Proteomics Initiative.]]
<div style="clear:both"></div>
[[Category: Shirouzu, M.]]
__TOC__
[[Category: Terada, T.]]
</StructureSection>
[[Category: Yokoyama, S.]]
[[Category: Large Structures]]
[[Category: Conserved hypothetical protein]]
[[Category: Thermus thermophilus HB8]]
[[Category: National project on protein structural and functional analyse]]
[[Category: Arai R]]
[[Category: Nppsfa]]
[[Category: Fusatomi E]]
[[Category: Pii-like signaling protein]]
[[Category: Kawaguchi S]]
[[Category: Riken structural genomics/proteomics initiative]]
[[Category: Kukimoto-Niino M]]
[[Category: Rsgi]]
[[Category: Shirouzu M]]
[[Category: Structural genomic]]
[[Category: Terada T]]
 
[[Category: Yokoyama S]]
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sun Sep 28 18:34:49 2008''

Latest revision as of 14:32, 22 May 2024

Crystal structure of a putative PII-like signaling protein (TTHA0516) from Thermus thermophilus HB8Crystal structure of a putative PII-like signaling protein (TTHA0516) from Thermus thermophilus HB8

Structural highlights

2cz4 is a 3 chain structure with sequence from Thermus thermophilus HB8. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Method:X-ray diffraction, Resolution 1.93Å
Ligands:, ,
Resources:FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT, TOPSAN

Function

Q5SKX7_THET8

Evolutionary Conservation

Check, as determined by ConSurfDB. You may read the explanation of the method and the full data available from ConSurf.

2cz4, resolution 1.93Å

Drag the structure with the mouse to rotate

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OCA
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