2dwq: Difference between revisions

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[[Image:2dwq.png|left|200px]]


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==Thermus thermophilus YchF GTP-binding protein==
The line below this paragraph, containing "STRUCTURE_2dwq", creates the "Structure Box" on the page.
<StructureSection load='2dwq' size='340' side='right'caption='[[2dwq]], [[Resolution|resolution]] 2.95&Aring;' scene=''>
You may change the PDB parameter (which sets the PDB file loaded into the applet)
== Structural highlights ==
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
<table><tr><td colspan='2'>[[2dwq]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Thermus_thermophilus_HB8 Thermus thermophilus HB8]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2DWQ OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2DWQ FirstGlance]. <br>
or leave the SCENE parameter empty for the default display.
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.95&#8491;</td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2dwq FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2dwq OCA], [https://pdbe.org/2dwq PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2dwq RCSB], [https://www.ebi.ac.uk/pdbsum/2dwq PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2dwq ProSAT], [https://www.topsan.org/Proteins/RSGI/2dwq TOPSAN]</span></td></tr>
{{STRUCTURE_2dwq| PDB=2dwq |  SCENE= }}
</table>
== Function ==
[https://www.uniprot.org/uniprot/Q5SJ29_THET8 Q5SJ29_THET8] ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner.[HAMAP-Rule:MF_00944]
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
Check<jmol>
  <jmolCheckbox>
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/dw/2dwq_consurf.spt"</scriptWhenChecked>
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
    <text>to colour the structure by Evolutionary Conservation</text>
  </jmolCheckbox>
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2dwq ConSurf].
<div style="clear:both"></div>


===Thermus thermophilus YchF GTP-binding protein===
==See Also==
 
*[[GTP-binding protein 3D structures|GTP-binding protein 3D structures]]
 
__TOC__
==About this Structure==
</StructureSection>
2DWQ is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Thermus_thermophilus Thermus thermophilus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2DWQ OCA].
[[Category: Large Structures]]
[[Category: Single protein]]
[[Category: Thermus thermophilus HB8]]
[[Category: Thermus thermophilus]]
[[Category: Kukimoto-Niino M]]
[[Category: Kukimoto-Niino, M.]]
[[Category: Kuramitsu S]]
[[Category: Kuramitsu, S.]]
[[Category: Murayama K]]
[[Category: Murayama, K.]]
[[Category: Shorouzu M]]
[[Category: RSGI, RIKEN Structural Genomics/Proteomics Initiative.]]
[[Category: Yokoyama S]]
[[Category: Shorouzu, M.]]
[[Category: Yokoyama, S.]]
[[Category: Gtp-binding]]
[[Category: National project on protein structural and functional analyse]]
[[Category: Nppsfa]]
[[Category: Riken structural genomics/proteomics initiative]]
[[Category: Rsgi]]
[[Category: Signal transduction]]
[[Category: Structural genomic]]
[[Category: Tgs domain]]
 
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sun Sep 28 18:09:32 2008''

Latest revision as of 11:31, 25 October 2023

Thermus thermophilus YchF GTP-binding proteinThermus thermophilus YchF GTP-binding protein

Structural highlights

2dwq is a 2 chain structure with sequence from Thermus thermophilus HB8. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Method:X-ray diffraction, Resolution 2.95Å
Resources:FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT, TOPSAN

Function

Q5SJ29_THET8 ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner.[HAMAP-Rule:MF_00944]

Evolutionary Conservation

Check, as determined by ConSurfDB. You may read the explanation of the method and the full data available from ConSurf.

See Also

2dwq, resolution 2.95Å

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