3clk: Difference between revisions

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[[Image:3clk.png|left|200px]]


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==Crystal structure of a transcription regulator from Lactobacillus plantarum==
The line below this paragraph, containing "STRUCTURE_3clk", creates the "Structure Box" on the page.
<StructureSection load='3clk' size='340' side='right'caption='[[3clk]], [[Resolution|resolution]] 2.08&Aring;' scene=''>
You may change the PDB parameter (which sets the PDB file loaded into the applet)
== Structural highlights ==
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
<table><tr><td colspan='2'>[[3clk]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Lactiplantibacillus_plantarum_WCFS1 Lactiplantibacillus plantarum WCFS1]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3CLK OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3CLK FirstGlance]. <br>
or leave the SCENE parameter empty for the default display.
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.08&#8491;</td></tr>
-->
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
{{STRUCTURE_3clk|  PDB=3clk  |  SCENE=  }}
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3clk FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3clk OCA], [https://pdbe.org/3clk PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3clk RCSB], [https://www.ebi.ac.uk/pdbsum/3clk PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3clk ProSAT], [https://www.topsan.org/Proteins/NYSGXRC/3clk TOPSAN]</span></td></tr>
 
</table>
===Crystal structure of a transcription regulator from Lactobacillus plantarum===
== Function ==
 
[https://www.uniprot.org/uniprot/F9ULH5_LACPL F9ULH5_LACPL]  
 
== Evolutionary Conservation ==
==About this Structure==
[[Image:Consurf_key_small.gif|200px|right]]
3CLK is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Lactobacillus_plantarum_wcfs1 Lactobacillus plantarum wcfs1]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3CLK OCA].  
Check<jmol>
[[Category: Lactobacillus plantarum wcfs1]]
  <jmolCheckbox>
[[Category: Single protein]]
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/cl/3clk_consurf.spt"</scriptWhenChecked>
[[Category: Burley, S K.]]
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
[[Category: NYSGXRC, New York Structural GenomiX Research Consortium.]]
    <text>to colour the structure by Evolutionary Conservation</text>
[[Category: Sugadev, R.]]
  </jmolCheckbox>
[[Category: Swaminathan, S.]]
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3clk ConSurf].
[[Category: 11017j]]
<div style="clear:both"></div>
[[Category: Dimer]]
__TOC__
[[Category: Dna-binding]]
</StructureSection>
[[Category: New york structural genomix research consortium]]
[[Category: Lactiplantibacillus plantarum WCFS1]]
[[Category: Nysgxrc]]
[[Category: Large Structures]]
[[Category: Protein structure initiative]]
[[Category: Burley SK]]
[[Category: Psi-ii]]
[[Category: Sugadev R]]
[[Category: Structural genomic]]
[[Category: Swaminathan S]]
[[Category: Transcription]]
[[Category: Transcription regulation]]
[[Category: Transcription regulator]]
 
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sun Sep 28 15:39:43 2008''

Latest revision as of 04:41, 21 November 2024

Crystal structure of a transcription regulator from Lactobacillus plantarumCrystal structure of a transcription regulator from Lactobacillus plantarum

Structural highlights

3clk is a 2 chain structure with sequence from Lactiplantibacillus plantarum WCFS1. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Method:X-ray diffraction, Resolution 2.08Å
Ligands:,
Resources:FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT, TOPSAN

Function

F9ULH5_LACPL

Evolutionary Conservation

Check, as determined by ConSurfDB. You may read the explanation of the method and the full data available from ConSurf.

3clk, resolution 2.08Å

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)Proteopedia Page Contributors and Editors (what is this?)

OCA
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