3ec7: Difference between revisions

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[[Image:3ec7.jpg|left|200px]]


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==Crystal Structure of Putative Dehydrogenase from Salmonella typhimurium LT2==
The line below this paragraph, containing "STRUCTURE_3ec7", creates the "Structure Box" on the page.
<StructureSection load='3ec7' size='340' side='right'caption='[[3ec7]], [[Resolution|resolution]] 2.15&Aring;' scene=''>
You may change the PDB parameter (which sets the PDB file loaded into the applet)
== Structural highlights ==
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
<table><tr><td colspan='2'>[[3ec7]] is a 8 chain structure with sequence from [https://en.wikipedia.org/wiki/Salmonella_enterica_subsp._enterica_serovar_Typhimurium_str._LT2 Salmonella enterica subsp. enterica serovar Typhimurium str. LT2]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3EC7 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3EC7 FirstGlance]. <br>
or leave the SCENE parameter empty for the default display.
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.15&#8491;</td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ACY:ACETIC+ACID'>ACY</scene>, <scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=EPE:4-(2-HYDROXYETHYL)-1-PIPERAZINE+ETHANESULFONIC+ACID'>EPE</scene>, <scene name='pdbligand=K:POTASSIUM+ION'>K</scene>, <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene>, <scene name='pdbligand=NAD:NICOTINAMIDE-ADENINE-DINUCLEOTIDE'>NAD</scene></td></tr>
{{STRUCTURE_3ec7|  PDB=3ec7  |  SCENE=  }}
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3ec7 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3ec7 OCA], [https://pdbe.org/3ec7 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3ec7 RCSB], [https://www.ebi.ac.uk/pdbsum/3ec7 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3ec7 ProSAT], [https://www.topsan.org/Proteins/MCSG/3ec7 TOPSAN]</span></td></tr>
 
</table>
===Crystal Structure of Putative Dehydrogenase from Salmonella typhimurium LT2===
== Function ==
 
[https://www.uniprot.org/uniprot/IOLG_SALTY IOLG_SALTY] Involved in the oxidation of myo-inositol (MI) to 2-keto-myo-inositol (2KMI or 2-inosose).[HAMAP-Rule:MF_01671]
 
== Evolutionary Conservation ==
==About this Structure==
[[Image:Consurf_key_small.gif|200px|right]]
3EC7 is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Salmonella_typhimurium_lt2 Salmonella typhimurium lt2]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3EC7 OCA].  
Check<jmol>
[[Category: Salmonella typhimurium lt2]]
  <jmolCheckbox>
[[Category: Single protein]]
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ec/3ec7_consurf.spt"</scriptWhenChecked>
[[Category: Edwards, A.]]
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
[[Category: Evdokimova, E.]]
    <text>to colour the structure by Evolutionary Conservation</text>
[[Category: Joachimiak, A.]]
  </jmolCheckbox>
[[Category: Kim, Y.]]
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3ec7 ConSurf].
[[Category: Kudritska, M.]]
<div style="clear:both"></div>
[[Category: MCSG, Midwest Center for Structural Genomics.]]
__TOC__
[[Category: Savchenko, A.]]
</StructureSection>
[[Category: Alpha-beta]]
[[Category: Large Structures]]
[[Category: Mcsg]]
[[Category: Salmonella enterica subsp. enterica serovar Typhimurium str. LT2]]
[[Category: Midwest center for structural genomic]]
[[Category: Edwards A]]
[[Category: Oxidoreductase]]
[[Category: Evdokimova E]]
[[Category: Protein structure initiative]]
[[Category: Joachimiak A]]
[[Category: Psi-2]]
[[Category: Kim Y]]
[[Category: Structural genomic]]
[[Category: Kudritska M]]
[[Category: Unknown function]]
[[Category: Savchenko A]]
 
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Sep 24 10:49:09 2008''

Latest revision as of 12:03, 30 October 2024

Crystal Structure of Putative Dehydrogenase from Salmonella typhimurium LT2Crystal Structure of Putative Dehydrogenase from Salmonella typhimurium LT2

Structural highlights

3ec7 is a 8 chain structure with sequence from Salmonella enterica subsp. enterica serovar Typhimurium str. LT2. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Method:X-ray diffraction, Resolution 2.15Å
Ligands:, , , , ,
Resources:FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT, TOPSAN

Function

IOLG_SALTY Involved in the oxidation of myo-inositol (MI) to 2-keto-myo-inositol (2KMI or 2-inosose).[HAMAP-Rule:MF_01671]

Evolutionary Conservation

Check, as determined by ConSurfDB. You may read the explanation of the method and the full data available from ConSurf.

3ec7, resolution 2.15Å

Drag the structure with the mouse to rotate

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