3dr3: Difference between revisions

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[[Image:3dr3.jpg|left|200px]]


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==Structure of IDP00107, a potential N-acetyl-gamma-glutamylphosphate reductase from Shigella flexneri==
The line below this paragraph, containing "STRUCTURE_3dr3", creates the "Structure Box" on the page.
<StructureSection load='3dr3' size='340' side='right'caption='[[3dr3]], [[Resolution|resolution]] 2.00&Aring;' scene=''>
You may change the PDB parameter (which sets the PDB file loaded into the applet)
== Structural highlights ==
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
<table><tr><td colspan='2'>[[3dr3]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Shigella_flexneri Shigella flexneri]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3DR3 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3DR3 FirstGlance]. <br>
or leave the SCENE parameter empty for the default display.
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2&#8491;</td></tr>
-->
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MLT:D-MALATE'>MLT</scene>, <scene name='pdbligand=NA:SODIUM+ION'>NA</scene></td></tr>
{{STRUCTURE_3dr3|  PDB=3dr3  |  SCENE=  }}
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3dr3 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3dr3 OCA], [https://pdbe.org/3dr3 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3dr3 RCSB], [https://www.ebi.ac.uk/pdbsum/3dr3 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3dr3 ProSAT], [https://www.topsan.org/Proteins/CSGID/3dr3 TOPSAN]</span></td></tr>
 
</table>
===Structure of IDP00107, a potential N-acetyl-gamma-glutamylphosphate reductase from Shigella flexneri===
== Function ==
 
[https://www.uniprot.org/uniprot/ARGC_SHIFL ARGC_SHIFL]
 
== Evolutionary Conservation ==
==About this Structure==
[[Image:Consurf_key_small.gif|200px|right]]
3DR3 is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Shigella_flexneri Shigella flexneri]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3DR3 OCA].  
Check<jmol>
[[Category: N-acetyl-gamma-glutamyl-phosphate reductase]]
  <jmolCheckbox>
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/dr/3dr3_consurf.spt"</scriptWhenChecked>
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
    <text>to colour the structure by Evolutionary Conservation</text>
  </jmolCheckbox>
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3dr3 ConSurf].
<div style="clear:both"></div>
__TOC__
</StructureSection>
[[Category: Large Structures]]
[[Category: Shigella flexneri]]
[[Category: Shigella flexneri]]
[[Category: Single protein]]
[[Category: Anderson WF]]
[[Category: Anderson, W F.]]
[[Category: Edwards AM]]
[[Category: CSGID, Center for Structural Genomics of Infectious Diseases.]]
[[Category: Onopriyenko O]]
[[Category: Edwards, A M.]]
[[Category: Savchenko A]]
[[Category: Onopriyenko, O.]]
[[Category: Singer AU]]
[[Category: Savchenko, A.]]
[[Category: Skarina T]]
[[Category: Singer, A U.]]
[[Category: Skarina, T.]]
[[Category: Amino-acid biosynthesis]]
[[Category: Argc]]
[[Category: Arginine biosynthesis]]
[[Category: Center for structural genomics of infectious disease]]
[[Category: Csgid target]]
[[Category: Cytoplasm]]
[[Category: Essential gene]]
[[Category: Nadp]]
[[Category: Oxidoreductase. funded by the national institute of allergy and infectious diseases of nih contract number hhsn272200700058c]]
[[Category: Shigella flexneri]]
[[Category: Structural genomic]]
 
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Aug  6 13:06:50 2008''

Latest revision as of 15:51, 30 August 2023

Structure of IDP00107, a potential N-acetyl-gamma-glutamylphosphate reductase from Shigella flexneriStructure of IDP00107, a potential N-acetyl-gamma-glutamylphosphate reductase from Shigella flexneri

Structural highlights

3dr3 is a 1 chain structure with sequence from Shigella flexneri. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Method:X-ray diffraction, Resolution 2Å
Ligands:,
Resources:FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT, TOPSAN

Function

ARGC_SHIFL

Evolutionary Conservation

Check, as determined by ConSurfDB. You may read the explanation of the method and the full data available from ConSurf.

3dr3, resolution 2.00Å

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)Proteopedia Page Contributors and Editors (what is this?)

OCA
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