2b0t: Difference between revisions

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{{Seed}}
[[Image:2b0t.png|left|200px]]


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==Structure of Monomeric NADP Isocitrate dehydrogenase==
The line below this paragraph, containing "STRUCTURE_2b0t", creates the "Structure Box" on the page.
<StructureSection load='2b0t' size='340' side='right'caption='[[2b0t]], [[Resolution|resolution]] 1.75&Aring;' scene=''>
You may change the PDB parameter (which sets the PDB file loaded into the applet)
== Structural highlights ==
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
<table><tr><td colspan='2'>[[2b0t]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Corynebacterium_glutamicum Corynebacterium glutamicum]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2B0T OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2B0T FirstGlance]. <br>
or leave the SCENE parameter empty for the default display.
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.75&#8491;</td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene></td></tr>
{{STRUCTURE_2b0t|  PDB=2b0t |  SCENE= }}
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2b0t FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2b0t OCA], [https://pdbe.org/2b0t PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2b0t RCSB], [https://www.ebi.ac.uk/pdbsum/2b0t PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2b0t ProSAT]</span></td></tr>
</table>
== Function ==
[https://www.uniprot.org/uniprot/IDH_CORGL IDH_CORGL]
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
Check<jmol>
  <jmolCheckbox>
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/b0/2b0t_consurf.spt"</scriptWhenChecked>
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
    <text>to colour the structure by Evolutionary Conservation</text>
  </jmolCheckbox>
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2b0t ConSurf].
<div style="clear:both"></div>


===Structure of Monomeric NADP Isocitrate dehydrogenase===
==See Also==
 
*[[Isocitrate dehydrogenase 3D structures|Isocitrate dehydrogenase 3D structures]]
 
__TOC__
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</StructureSection>
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(as it appears on PubMed at http://www.pubmed.gov), where 16416443 is the PubMed ID number.
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{{ABSTRACT_PUBMED_16416443}}
 
==About this Structure==
2B0T is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Corynebacterium_glutamicum Corynebacterium glutamicum]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2B0T OCA].
 
==Reference==
Substrate-free structure of a monomeric NADP isocitrate dehydrogenase: an open conformation phylogenetic relationship of isocitrate dehydrogenase., Imabayashi F, Aich S, Prasad L, Delbaere LT, Proteins. 2006 Apr 1;63(1):100-12. PMID:[http://www.ncbi.nlm.nih.gov/pubmed/16416443 16416443]
[[Category: Corynebacterium glutamicum]]
[[Category: Corynebacterium glutamicum]]
[[Category: Single protein]]
[[Category: Large Structures]]
[[Category: Aich, S.]]
[[Category: Aich S]]
[[Category: Delbaere, L T.]]
[[Category: Delbaere LT]]
[[Category: Imabayashi, F.]]
[[Category: Imabayashi F]]
[[Category: Prasad, L.]]
[[Category: Prasad L]]
[[Category: Idh]]
[[Category: Monomeric]]
[[Category: Nadp]]
 
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Tue Jul 29 11:54:00 2008''

Latest revision as of 12:15, 14 February 2024

Structure of Monomeric NADP Isocitrate dehydrogenaseStructure of Monomeric NADP Isocitrate dehydrogenase

Structural highlights

2b0t is a 1 chain structure with sequence from Corynebacterium glutamicum. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Method:X-ray diffraction, Resolution 1.75Å
Ligands:
Resources:FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT

Function

IDH_CORGL

Evolutionary Conservation

Check, as determined by ConSurfDB. You may read the explanation of the method and the full data available from ConSurf.

See Also

2b0t, resolution 1.75Å

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