1vjh: Difference between revisions

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{{Seed}}
[[Image:1vjh.png|left|200px]]


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==Crystal structure of gene product of At1g24000 from Arabidopsis thaliana==
The line below this paragraph, containing "STRUCTURE_1vjh", creates the "Structure Box" on the page.
<StructureSection load='1vjh' size='340' side='right'caption='[[1vjh]], [[Resolution|resolution]] 2.10&Aring;' scene=''>
You may change the PDB parameter (which sets the PDB file loaded into the applet)
== Structural highlights ==
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
<table><tr><td colspan='2'>[[1vjh]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Arabidopsis_thaliana Arabidopsis thaliana]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1VJH OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1VJH FirstGlance]. <br>
or leave the SCENE parameter empty for the default display.
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.1&#8491;</td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
{{STRUCTURE_1vjh|  PDB=1vjh  |  SCENE= }}
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1vjh FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1vjh OCA], [https://pdbe.org/1vjh PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1vjh RCSB], [https://www.ebi.ac.uk/pdbsum/1vjh PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1vjh ProSAT], [https://www.topsan.org/Proteins/CESG/1vjh TOPSAN]</span></td></tr>
 
</table>
===Gene Product of At1g24000 from Arabidopsis thaliana===
== Function ==
 
[https://www.uniprot.org/uniprot/Y1400_ARATH Y1400_ARATH]
 
== Evolutionary Conservation ==
==About this Structure==
[[Image:Consurf_key_small.gif|200px|right]]
1VJH is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Arabidopsis_thaliana Arabidopsis thaliana]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1VJH OCA].  
Check<jmol>
 
  <jmolCheckbox>
==Reference==
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/vj/1vjh_consurf.spt"</scriptWhenChecked>
1H, 15N and 13C resonance assignments of the putative Bet v 1 family protein At1g24000.1 from Arabidopsis thaliana., Song J, Zhao Q, Lee MS, Markley JL, J Biomol NMR. 2005 Aug;32(4):335. PMID:[http://www.ncbi.nlm.nih.gov/pubmed/16211487 16211487]
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
    <text>to colour the structure by Evolutionary Conservation</text>
  </jmolCheckbox>
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1vjh ConSurf].
<div style="clear:both"></div>
__TOC__
</StructureSection>
[[Category: Arabidopsis thaliana]]
[[Category: Arabidopsis thaliana]]
[[Category: Single protein]]
[[Category: Large Structures]]
[[Category: Bingman, C A.]]
[[Category: Bingman CA]]
[[Category: CESG, Center for Eukaryotic Structural Genomics.]]
[[Category: Johnson KA]]
[[Category: Johnson, K A.]]
[[Category: Phillips Jr GN]]
[[Category: Jr., G N.Phillips.]]
[[Category: Smith DW]]
[[Category: Smith, D W.]]
[[Category: Wesenberg GE]]
[[Category: Wesenberg, G E.]]
[[Category: Arabidopsis thaliana]]
[[Category: Center for eukaryotic structural genomic]]
[[Category: Cesg]]
[[Category: Plant protein]]
[[Category: Protein structure initiative]]
[[Category: Structural genomic]]
 
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Tue Jul 29 06:42:59 2008''

Latest revision as of 03:04, 28 December 2023

Crystal structure of gene product of At1g24000 from Arabidopsis thalianaCrystal structure of gene product of At1g24000 from Arabidopsis thaliana

Structural highlights

1vjh is a 2 chain structure with sequence from Arabidopsis thaliana. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Method:X-ray diffraction, Resolution 2.1Å
Ligands:
Resources:FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT, TOPSAN

Function

Y1400_ARATH

Evolutionary Conservation

Check, as determined by ConSurfDB. You may read the explanation of the method and the full data available from ConSurf.

1vjh, resolution 2.10Å

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)Proteopedia Page Contributors and Editors (what is this?)

OCA
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