2gr0: Difference between revisions

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-{{Seed}}
-[[Image:2gr0.png|left|200px]]
-<!--
+==Crystal structure of Ferredoxin reductase, BphA4 (oxidized form, NAD+ complex)==
-The line below this paragraph, containing "STRUCTURE_2gr0", creates the "Structure Box" on the page.
+<StructureSection load='2gr0' size='340' side='right'caption='[[2gr0]], [[Resolution|resolution]] 1.70&Aring;' scene=''>
-You may change the PDB parameter (which sets the PDB file loaded into the applet)
+== Structural highlights ==
-or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+<table><tr><td colspan='2'>[[2gr0]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Pseudomonas_sp._KKS102 Pseudomonas sp. KKS102]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2GR0 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2GR0 FirstGlance]. <br>
-or leave the SCENE parameter empty for the default display.
+</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.7&#8491;</td></tr>
--->
+<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ADP:ADENOSINE-5-DIPHOSPHATE'>ADP</scene>, <scene name='pdbligand=FAD:FLAVIN-ADENINE+DINUCLEOTIDE'>FAD</scene></td></tr>
-{{STRUCTURE_2gr0|  PDB=2gr0  |  SCENE=  }}
+<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2gr0 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2gr0 OCA], [https://pdbe.org/2gr0 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2gr0 RCSB], [https://www.ebi.ac.uk/pdbsum/2gr0 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2gr0 ProSAT]</span></td></tr>
+</table>
-===Crystal structure of Ferredoxin reductase, BphA4 (oxidized form, NAD+ complex)===
+== Function ==
+[https://www.uniprot.org/uniprot/Q52437_PSES1 Q52437_PSES1]
+== Evolutionary Conservation ==
-<!--
+[[Image:Consurf_key_small.gif|200px|right]]
-The line below this paragraph, {{ABSTRACT_PUBMED_17850818}}, adds the Publication Abstract to the page
+Check<jmol>
-(as it appears on PubMed at http://www.pubmed.gov), where 17850818 is the PubMed ID number.
+  <jmolCheckbox>
--->
+    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/gr/2gr0_consurf.spt"</scriptWhenChecked>
-{{ABSTRACT_PUBMED_17850818}}
+    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
+    <text>to colour the structure by Evolutionary Conservation</text>
-==About this Structure==
+  </jmolCheckbox>
-GR0 is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Pseudomonas_sp._kks102 Pseudomonas sp. kks102]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2GR0 OCA].
+</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2gr0 ConSurf].
+<div style="clear:both"></div>
-==Reference==
+__TOC__
-Molecular mechanism of the redox-dependent interaction between NADH-dependent ferredoxin reductase and Rieske-type [2Fe-2S] ferredoxin., Senda M, Kishigami S, Kimura S, Fukuda M, Ishida T, Senda T, J Mol Biol. 2007 Oct 19;373(2):382-400. Epub 2007 Aug 19. PMID:[http://www.ncbi.nlm.nih.gov/pubmed/17850818 17850818]
+</StructureSection>
-[[Category: Pseudomonas sp. kks102]]
+[[Category: Large Structures]]
-[[Category: Single protein]]
+[[Category: Pseudomonas sp. KKS102]]
-[[Category: Senda, M.]]
+[[Category: Senda M]]
-[[Category: Senda, T.]]
+[[Category: Senda T]]
-[[Category: Flavoprotein]]
-[[Category: Oxidoreductase]]
-''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Tue Jul 29 06:02:17 2008''