2f42: Difference between revisions

← Older edit

Proteopedia Page Contributors and Editors (what is this?)Proteopedia Page Contributors and Editors (what is this?)

OCA

@@ Line 1: / Line 1: @@
-{{Seed}}
-[[Image:2f42.png|left|200px]]
-<!--
+==dimerization and U-box domains of Zebrafish C-terminal of HSP70 interacting protein==
-The line below this paragraph, containing "STRUCTURE_2f42", creates the "Structure Box" on the page.
+<StructureSection load='2f42' size='340' side='right'caption='[[2f42]], [[Resolution|resolution]] 2.50&Aring;' scene=''>
-You may change the PDB parameter (which sets the PDB file loaded into the applet)
+== Structural highlights ==
-or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+<table><tr><td colspan='2'>[[2f42]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Danio_rerio Danio rerio]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2F42 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2F42 FirstGlance]. <br>
-or leave the SCENE parameter empty for the default display.
+</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.5&#8491;</td></tr>
--->
+<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene></td></tr>
-{{STRUCTURE_2f42|  PDB=2f42  |  SCENE=  }}
+<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2f42 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2f42 OCA], [https://pdbe.org/2f42 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2f42 RCSB], [https://www.ebi.ac.uk/pdbsum/2f42 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2f42 ProSAT]</span></td></tr>
+</table>
-===dimerization and U-box domains of Zebrafish C-terminal of HSP70 interacting protein===
+== Function ==
+[https://www.uniprot.org/uniprot/F6NGW2_DANRE F6NGW2_DANRE]
+== Evolutionary Conservation ==
-<!--
+[[Image:Consurf_key_small.gif|200px|right]]
-The line below this paragraph, {{ABSTRACT_PUBMED_16605243}}, adds the Publication Abstract to the page
+Check<jmol>
-(as it appears on PubMed at http://www.pubmed.gov), where 16605243 is the PubMed ID number.
+  <jmolCheckbox>
--->
+    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/f4/2f42_consurf.spt"</scriptWhenChecked>
-{{ABSTRACT_PUBMED_16605243}}
+    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
+    <text>to colour the structure by Evolutionary Conservation</text>
-==About this Structure==
+  </jmolCheckbox>
-F42 is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Danio_rerio Danio rerio]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2F42 OCA].
+</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2f42 ConSurf].
+<div style="clear:both"></div>
-==Reference==
+__TOC__
-Structure and interactions of the helical and U-box domains of CHIP, the C terminus of HSP70 interacting protein., Xu Z, Devlin KI, Ford MG, Nix JC, Qin J, Misra S, Biochemistry. 2006 Apr 18;45(15):4749-59. PMID:[http://www.ncbi.nlm.nih.gov/pubmed/16605243 16605243]
+</StructureSection>
 [[Category: Danio rerio]]
-[[Category: Single protein]]
+[[Category: Large Structures]]
-[[Category: Misra, S.]]
+[[Category: Misra S]]
-[[Category: Nix, J C.]]
+[[Category: Nix JC]]
-[[Category: Xu, Z.]]
+[[Category: Xu Z]]
-[[Category: U-box]]
-''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Mon Jul 28 06:40:50 2008''