2fz4: Difference between revisions

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-{{Seed}}
-[[Image:2fz4.png|left|200px]]
-<!--
+==Crystal Structure of the N-terminal half of Archaeoglobus Fulgidus XPB==
-The line below this paragraph, containing "STRUCTURE_2fz4", creates the "Structure Box" on the page.
+<StructureSection load='2fz4' size='340' side='right'caption='[[2fz4]], [[Resolution|resolution]] 2.40&Aring;' scene=''>
-You may change the PDB parameter (which sets the PDB file loaded into the applet)
+== Structural highlights ==
-or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+<table><tr><td colspan='2'>[[2fz4]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Archaeoglobus_fulgidus_DSM_4304 Archaeoglobus fulgidus DSM 4304]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2FZ4 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2FZ4 FirstGlance]. <br>
-or leave the SCENE parameter empty for the default display.
+</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.4&#8491;</td></tr>
--->
+<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2fz4 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2fz4 OCA], [https://pdbe.org/2fz4 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2fz4 RCSB], [https://www.ebi.ac.uk/pdbsum/2fz4 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2fz4 ProSAT]</span></td></tr>
-{{STRUCTURE_2fz4|  PDB=2fz4  |  SCENE=  }}
+</table>
+== Function ==
-===Crystal Structure of the N-terminal half of Archaeoglobus Fulgidus XPB===
+[https://www.uniprot.org/uniprot/O29889_ARCFU O29889_ARCFU]
+== Evolutionary Conservation ==
+[[Image:Consurf_key_small.gif|200px|right]]
-<!--
+Check<jmol>
-The line below this paragraph, {{ABSTRACT_PUBMED_16600867}}, adds the Publication Abstract to the page
+  <jmolCheckbox>
-(as it appears on PubMed at http://www.pubmed.gov), where 16600867 is the PubMed ID number.
+    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/fz/2fz4_consurf.spt"</scriptWhenChecked>
--->
+    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
-{{ABSTRACT_PUBMED_16600867}}
+    <text>to colour the structure by Evolutionary Conservation</text>
+  </jmolCheckbox>
-==About this Structure==
+</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2fz4 ConSurf].
-FZ4 is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Archaeoglobus_fulgidus_dsm_4304 Archaeoglobus fulgidus dsm 4304]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2FZ4 OCA].
+<div style="clear:both"></div>
+__TOC__
-==Reference==
+</StructureSection>
-Conserved XPB core structure and motifs for DNA unwinding: implications for pathway selection of transcription or excision repair., Fan L, Arvai AS, Cooper PK, Iwai S, Hanaoka F, Tainer JA, Mol Cell. 2006 Apr 7;22(1):27-37. PMID:[http://www.ncbi.nlm.nih.gov/pubmed/16600867 16600867]
+[[Category: Archaeoglobus fulgidus DSM 4304]]
-[[Category: Archaeoglobus fulgidus dsm 4304]]
+[[Category: Large Structures]]
-[[Category: Single protein]]
+[[Category: Fan L]]
-[[Category: Fan, L.]]
+[[Category: Tainer JA]]
-[[Category: Tainer, J A.]]
-[[Category: Dna damage recognition domain]]
-[[Category: Reca-like domain]]
-''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Mon Jul 28 02:36:47 2008''