3d89: Difference between revisions

← Older edit

Proteopedia Page Contributors and Editors (what is this?)Proteopedia Page Contributors and Editors (what is this?)

OCA

@@ Line 1: / Line 1: @@
-{{Seed}}
-[[Image:3d89.jpg|left|200px]]
-<!--
+==Crystal Structure of a Soluble Rieske Ferredoxin from Mus musculus==
-The line below this paragraph, containing "STRUCTURE_3d89", creates the "Structure Box" on the page.
+<StructureSection load='3d89' size='340' side='right'caption='[[3d89]], [[Resolution|resolution]] 2.07&Aring;' scene=''>
-You may change the PDB parameter (which sets the PDB file loaded into the applet)
+== Structural highlights ==
-or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+<table><tr><td colspan='2'>[[3d89]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Mus_musculus Mus musculus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3D89 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3D89 FirstGlance]. <br>
-or leave the SCENE parameter empty for the default display.
+</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.071&#8491;</td></tr>
--->
+<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=FES:FE2/S2+(INORGANIC)+CLUSTER'>FES</scene></td></tr>
-{{STRUCTURE_3d89|  PDB=3d89  |  SCENE=  }}
+<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3d89 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3d89 OCA], [https://pdbe.org/3d89 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3d89 RCSB], [https://www.ebi.ac.uk/pdbsum/3d89 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3d89 ProSAT]</span></td></tr>
+</table>
-===Crystal Structure of a Soluble Rieske Ferredoxin from Mus musculus===
+== Function ==
+[https://www.uniprot.org/uniprot/RFESD_MOUSE RFESD_MOUSE]
+== Evolutionary Conservation ==
-==About this Structure==
+[[Image:Consurf_key_small.gif|200px|right]]
-D89 is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Mus_musculus Mus musculus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3D89 OCA].
+Check<jmol>
+  <jmolCheckbox>
+    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/d8/3d89_consurf.spt"</scriptWhenChecked>
+    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
+    <text>to colour the structure by Evolutionary Conservation</text>
+  </jmolCheckbox>
+</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3d89 ConSurf].
+<div style="clear:both"></div>
+__TOC__
+</StructureSection>
+[[Category: Large Structures]]
 [[Category: Mus musculus]]
-[[Category: Single protein]]
+[[Category: Bingman CA]]
-[[Category: Bingman, C A.]]
+[[Category: Elsen NL]]
-[[Category: CESG, Center for Eukaryotic Structural Genomics.]]
+[[Category: Fox BG]]
-[[Category: Elsen, N L.]]
+[[Category: Levin EJ]]
-[[Category: Fox, B G.]]
+[[Category: McCoy JG]]
-[[Category: Jr., G N.Phillips.]]
+[[Category: Phillips Jr GN]]
-[[Category: Levin, E J.]]
+[[Category: Seder KD]]
-[[Category: McCoy, J G.]]
+[[Category: Wesenberg GE]]
-[[Category: Seder, K D.]]
-[[Category: Wesenberg, G E.]]
-[[Category: 2fe-2]]
-[[Category: Alternative splicing]]
-[[Category: Casp target]]
-[[Category: Center for eukaryotic structural genomic]]
-[[Category: Cesg]]
-[[Category: Electron transport]]
-[[Category: Iron]]
-[[Category: Iron-sulfur]]
-[[Category: Metal-binding]]
-[[Category: Protein structure initiative]]
-[[Category: Psi]]
-[[Category: Rieske ferredoxin]]
-''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Jul 16 10:51:00 2008''