3db9: Difference between revisions

Proteopedia Page Contributors and Editors (what is this?)Proteopedia Page Contributors and Editors (what is this?)

OCA

@@ Line 1: / Line 1: @@
-'''Unreleased structure'''
-The entry 3db9 is ON HOLD  until Jul 24 2009
+==Crystal structure of UPF0317 protein Atu3911 from Agrobacterium tumefaciens. NorthEast Strcutural Genomics target AtR186==
+<StructureSection load='3db9' size='340' side='right'caption='[[3db9]], [[Resolution|resolution]] 2.80&Aring;' scene=''>
-Authors: Seetharaman, J., Abashidze, M., Wang, D., Janjua, H., Owens, L., Xiao, R., Liu, J., Baran, M.C., Acton, T.B., Rost, B., Montelione, G.T., Hunt, J.F., Tong, L., Northeast Structural Genomics Consortium (NESG)
+== Structural highlights ==
+<table><tr><td colspan='2'>[[3db9]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Agrobacterium_fabrum_str._C58 Agrobacterium fabrum str. C58]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3DB9 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3DB9 FirstGlance]. <br>
-Description: Crystal structure of UPF0317 protein Atu3911 from Agrobacterium tumefaciens. NorthEast Strcutural Genomics target AtR186 (CASP Target)
+</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.8&#8491;</td></tr>
+<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3db9 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3db9 OCA], [https://pdbe.org/3db9 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3db9 RCSB], [https://www.ebi.ac.uk/pdbsum/3db9 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3db9 ProSAT], [https://www.topsan.org/Proteins/NESGC/3db9 TOPSAN]</span></td></tr>
-''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Fri Jul 11 13:06:04 2008''
+</table>
+== Function ==
+[https://www.uniprot.org/uniprot/Y3911_AGRFC Y3911_AGRFC]
+== Evolutionary Conservation ==
+[[Image:Consurf_key_small.gif|200px|right]]
+Check<jmol>
+  <jmolCheckbox>
+    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/db/3db9_consurf.spt"</scriptWhenChecked>
+    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
+    <text>to colour the structure by Evolutionary Conservation</text>
+  </jmolCheckbox>
+</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3db9 ConSurf].
+<div style="clear:both"></div>
+__TOC__
+</StructureSection>
+[[Category: Agrobacterium fabrum str. C58]]
+[[Category: Large Structures]]
+[[Category: Abashidze M]]
+[[Category: Acton TB]]
+[[Category: Baran MC]]
+[[Category: Hunt JF]]
+[[Category: Janjua H]]
+[[Category: Liu J]]
+[[Category: Montelione GT]]
+[[Category: Owens L]]
+[[Category: Rost B]]
+[[Category: Seetharaman J]]
+[[Category: Tong L]]
+[[Category: Wang D]]
+[[Category: Xiao R]]