1jk0: Difference between revisions

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-{{Seed}}
-[[Image:1jk0.png|left|200px]]
-<!--
+==Ribonucleotide reductase Y2Y4 heterodimer==
-The line below this paragraph, containing "STRUCTURE_1jk0", creates the "Structure Box" on the page.
+<StructureSection load='1jk0' size='340' side='right'caption='[[1jk0]], [[Resolution|resolution]] 2.80&Aring;' scene=''>
-You may change the PDB parameter (which sets the PDB file loaded into the applet)
+== Structural highlights ==
-or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+<table><tr><td colspan='2'>[[1jk0]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Saccharomyces_cerevisiae Saccharomyces cerevisiae]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1JK0 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1JK0 FirstGlance]. <br>
-or leave the SCENE parameter empty for the default display.
+</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.8&#8491;</td></tr>
--->
+<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>
-{{STRUCTURE_1jk0|  PDB=1jk0  |  SCENE=  }}
+<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1jk0 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1jk0 OCA], [https://pdbe.org/1jk0 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1jk0 RCSB], [https://www.ebi.ac.uk/pdbsum/1jk0 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1jk0 ProSAT]</span></td></tr>
+</table>
+== Function ==
+[https://www.uniprot.org/uniprot/RIR4_YEAST RIR4_YEAST] Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides. RNR4 is required for proper folding of RNR2 and assembly with the large subunits.<ref>PMID:10535923</ref>
+== Evolutionary Conservation ==
+[[Image:Consurf_key_small.gif|200px|right]]
+Check<jmol>
+  <jmolCheckbox>
+    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/jk/1jk0_consurf.spt"</scriptWhenChecked>
+    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
+    <text>to colour the structure by Evolutionary Conservation</text>
+  </jmolCheckbox>
+</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1jk0 ConSurf].
+<div style="clear:both"></div>
-===Ribonucleotide reductase Y2Y4 heterodimer===
+==See Also==
+*[[Ribonucleotide reductase 3D structures|Ribonucleotide reductase 3D structures]]
+== References ==
-<!--
+<references/>
-The line below this paragraph, {{ABSTRACT_PUBMED_11526233}}, adds the Publication Abstract to the page
+__TOC__
-(as it appears on PubMed at http://www.pubmed.gov), where 11526233 is the PubMed ID number.
+</StructureSection>
--->
+[[Category: Large Structures]]
-{{ABSTRACT_PUBMED_11526233}}
-==About this Structure==
-JK0 is a [[Protein complex]] structure of sequences from [http://en.wikipedia.org/wiki/Saccharomyces_cerevisiae Saccharomyces cerevisiae]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1JK0 OCA].
-==Reference==
-Structure of the yeast ribonucleotide reductase Y2Y4 heterodimer., Voegtli WC, Ge J, Perlstein DL, Stubbe J, Rosenzweig AC, Proc Natl Acad Sci U S A. 2001 Aug 28;98(18):10073-8. PMID:[http://www.ncbi.nlm.nih.gov/pubmed/11526233 11526233]
-[[Category: Protein complex]]
-[[Category: Ribonucleoside-diphosphate reductase]]
 [[Category: Saccharomyces cerevisiae]]
-[[Category: Ge, J.]]
+[[Category: Ge J]]
-[[Category: Perlstein, D L.]]
+[[Category: Perlstein DL]]
-[[Category: Rosenzweig, A C.]]
+[[Category: Rosenzweig AC]]
-[[Category: Stubbe, J.]]
+[[Category: Stubbe J]]
-[[Category: Voegtli, W C.]]
+[[Category: Voegtli WC]]
-[[Category: R2]]
-[[Category: Ribonucleotide reductase]]
-''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Tue Jul  1 20:21:44 2008''