1g1m: Difference between revisions

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-{{Seed}}
-[[Image:1g1m.png|left|200px]]
-<!--
+==ALL-FERROUS NITROGENASE IRON PROTEIN FROM AZOTOBACTER VINELANDII==
-The line below this paragraph, containing "STRUCTURE_1g1m", creates the "Structure Box" on the page.
+<StructureSection load='1g1m' size='340' side='right'caption='[[1g1m]], [[Resolution|resolution]] 2.25&Aring;' scene=''>
-You may change the PDB parameter (which sets the PDB file loaded into the applet)
+== Structural highlights ==
-or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+<table><tr><td colspan='2'>[[1g1m]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Azotobacter_vinelandii Azotobacter vinelandii]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1G1M OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1G1M FirstGlance]. <br>
-or leave the SCENE parameter empty for the default display.
+</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.25&#8491;</td></tr>
--->
+<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=SF4:IRON/SULFUR+CLUSTER'>SF4</scene></td></tr>
-{{STRUCTURE_1g1m|  PDB=1g1m  |  SCENE=  }}
+<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1g1m FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1g1m OCA], [https://pdbe.org/1g1m PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1g1m RCSB], [https://www.ebi.ac.uk/pdbsum/1g1m PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1g1m ProSAT]</span></td></tr>
+</table>
+== Function ==
+[https://www.uniprot.org/uniprot/NIFH1_AZOVI NIFH1_AZOVI] The key enzymatic reactions in nitrogen fixation are catalyzed by the nitrogenase complex, which has 2 components: the iron protein (component 2) and a component 1 which is either a molybdenum-iron protein, a vanadium-iron, or an iron-iron protein.[HAMAP-Rule:MF_00533]
+== Evolutionary Conservation ==
+[[Image:Consurf_key_small.gif|200px|right]]
+Check<jmol>
+  <jmolCheckbox>
+    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/g1/1g1m_consurf.spt"</scriptWhenChecked>
+    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
+    <text>to colour the structure by Evolutionary Conservation</text>
+  </jmolCheckbox>
+</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1g1m ConSurf].
+<div style="clear:both"></div>
-===ALL-FERROUS NITROGENASE IRON PROTEIN FROM AZOTOBACTER VINELANDII===
+==See Also==
+*[[Nitrogenase 3D structures|Nitrogenase 3D structures]]
+__TOC__
-<!--
+</StructureSection>
-The line below this paragraph, {{ABSTRACT_PUBMED_11170381}}, adds the Publication Abstract to the page
-(as it appears on PubMed at http://www.pubmed.gov), where 11170381 is the PubMed ID number.
--->
-{{ABSTRACT_PUBMED_11170381}}
-==About this Structure==
-G1M is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Azotobacter_vinelandii Azotobacter vinelandii]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1G1M OCA].
-==Reference==
-Crystal structure of the all-ferrous [4Fe-4S]0 form of the nitrogenase iron protein from Azotobacter vinelandii., Strop P, Takahara PM, Chiu H, Angove HC, Burgess BK, Rees DC, Biochemistry. 2001 Jan 23;40(3):651-6. PMID:[http://www.ncbi.nlm.nih.gov/pubmed/11170381 11170381]
 [[Category: Azotobacter vinelandii]]
-[[Category: Nitrogenase]]
+[[Category: Large Structures]]
-[[Category: Single protein]]
+[[Category: Angove HC]]
-[[Category: Angove, H C.]]
+[[Category: Burgess BK]]
-[[Category: Burgess, B K.]]
+[[Category: Chiu H-J]]
-[[Category: Chiu, H J.]]
+[[Category: Rees DC]]
-[[Category: Rees, D C.]]
+[[Category: Strop P]]
-[[Category: Strop, P.]]
+[[Category: Takahara PM]]
-[[Category: Takahara, P M.]]
-[[Category: All-ferrous]]
-[[Category: Iron protein]]
-[[Category: Nitrogenase]]
-[[Category: Oxidoreductase]]
-''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Tue Jul  1 04:16:10 2008''