1fte: Difference between revisions

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OCA

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-[[Image:1fte.gif|left|200px]]<br /><applet load="1fte" size="450" color="white" frame="true" align="right" spinBox="true"
-caption="1fte, resolution 2.40&Aring;" />
-'''CRYSTAL STRUCTURE OF STREPTOCOCCUS PNEUMONIAE ACYL CARRIER PROTEIN SYNTHASE (NATIVE 1)'''<br />
-==Overview==
+==CRYSTAL STRUCTURE OF STREPTOCOCCUS PNEUMONIAE ACYL CARRIER PROTEIN SYNTHASE (NATIVE 1)==
-Acyl carrier protein synthase (AcpS) catalyzes the formation of holo-ACP, which mediates the essential transfer of acyl fatty acid intermediates, during the biosynthesis of fatty acids and lipids in the cell. Thus, AcpS, plays an important role in bacterial fatty acid and lipid biosynthesis, making it an attractive target for therapeutic intervention. We have, determined, for the first time, the crystal structure of the Streptococcus, pneumoniae AcpS and AcpS complexed with 3'5'-ADP, a product of AcpS, at, 2.0 and 1.9 A resolution, respectively. The crystal structure reveals an, alpha/beta fold and shows that AcpS assembles as a tightly packed, functional trimer, with a non-crystallographic pseudo-symmetric 3-fold, axis, which contains three active sites at the interface between, protomers. Only two active sites are occupied by the ligand molecules., Although there is virtually no sequence similarity between the, S.pneumoniae AcpS and the Bacillus subtilis Sfp transferase, a striking, structural similarity between both enzymes was observed. These data, provide a starting point for structure-based drug design efforts towards, the identification of AcpS inhibitors with potent antibacterial activity.
+<StructureSection load='1fte' size='340' side='right'caption='[[1fte]], [[Resolution|resolution]] 2.40&Aring;' scene=''>
+== Structural highlights ==
+<table><tr><td colspan='2'>[[1fte]] is a 3 chain structure with sequence from [https://en.wikipedia.org/wiki/Streptococcus_pneumoniae Streptococcus pneumoniae]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1FTE OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1FTE FirstGlance]. <br>
+</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.4&#8491;</td></tr>
+<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
+<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1fte FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1fte OCA], [https://pdbe.org/1fte PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1fte RCSB], [https://www.ebi.ac.uk/pdbsum/1fte PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1fte ProSAT]</span></td></tr>
+</table>
+== Function ==
+[https://www.uniprot.org/uniprot/ACPS_STRPN ACPS_STRPN] Transfers the 4'-phosphopantetheine moiety from coenzyme A to a Ser of acyl-carrier-protein (By similarity).[HAMAP-Rule:MF_00101]
+== Evolutionary Conservation ==
+[[Image:Consurf_key_small.gif|200px|right]]
+Check<jmol>
+  <jmolCheckbox>
+    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ft/1fte_consurf.spt"</scriptWhenChecked>
+    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
+    <text>to colour the structure by Evolutionary Conservation</text>
+  </jmolCheckbox>
+</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1fte ConSurf].
+<div style="clear:both"></div>
-==About this Structure==
+==See Also==
-FTE is a [http://en.wikipedia.org/wiki/Single_protein Single protein] structure of sequence from [http://en.wikipedia.org/wiki/Streptococcus_pneumoniae Streptococcus pneumoniae] with SO4 as [http://en.wikipedia.org/wiki/ligand ligand]. Active as [http://en.wikipedia.org/wiki/Holo-[acyl-carrier-protein]_synthase Holo-[acyl-carrier-protein] synthase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=2.7.8.7 2.7.8.7] Full crystallographic information is available from [http://ispc.weizmann.ac.il/oca-bin/ocashort?id=1FTE OCA].
+*[[Acyl carrier protein synthase 3D structures|Acyl carrier protein synthase 3D structures]]
+__TOC__
-==Reference==
+</StructureSection>
-Crystal structure of Streptococcus pneumoniae acyl carrier protein synthase: an essential enzyme in bacterial fatty acid biosynthesis., Chirgadze NY, Briggs SL, McAllister KA, Fischl AS, Zhao G, EMBO J. 2000 Oct 16;19(20):5281-7. PMID:[http://ispc.weizmann.ac.il//pmbin/getpm?pmid=11032795 11032795]
+[[Category: Large Structures]]
-[[Category: Holo-[acyl-carrier-protein] synthase]]
-[[Category: Single protein]]
 [[Category: Streptococcus pneumoniae]]
-[[Category: Briggs, S.]]
+[[Category: Briggs S]]
-[[Category: Chirgadze, N.]]
+[[Category: Chirgadze N]]
-[[Category: Fischl, A.]]
+[[Category: Fischl A]]
-[[Category: McAllister, K.]]
+[[Category: McAllister K]]
-[[Category: Zhao, G.]]
+[[Category: Zhao G]]
-[[Category: SO4]]
-[[Category: acyl carrier protein synthase]]
-[[Category: transferase]]
-''Page seeded by [http://ispc.weizmann.ac.il/oca OCA ] on Tue Nov 20 15:15:35 2007''