1f4p: Difference between revisions

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[[Image:1f4p.png|left|200px]]


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==Y98W FLAVODOXIN MUTANT 1.5A (D. VULGARIS)==
The line below this paragraph, containing "STRUCTURE_1f4p", creates the "Structure Box" on the page.
<StructureSection load='1f4p' size='340' side='right'caption='[[1f4p]], [[Resolution|resolution]] 1.30&Aring;' scene=''>
You may change the PDB parameter (which sets the PDB file loaded into the applet)
== Structural highlights ==
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
<table><tr><td colspan='2'>[[1f4p]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Desulfovibrio_vulgaris Desulfovibrio vulgaris]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1F4P OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1F4P FirstGlance]. <br>
or leave the SCENE parameter empty for the default display.
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.3&#8491;</td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=FMN:FLAVIN+MONONUCLEOTIDE'>FMN</scene></td></tr>
{{STRUCTURE_1f4p|  PDB=1f4p |  SCENE= }}
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1f4p FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1f4p OCA], [https://pdbe.org/1f4p PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1f4p RCSB], [https://www.ebi.ac.uk/pdbsum/1f4p PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1f4p ProSAT]</span></td></tr>
</table>
== Function ==
[https://www.uniprot.org/uniprot/FLAV_DESVH FLAV_DESVH] Low-potential electron donor to a number of redox enzymes.
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
Check<jmol>
  <jmolCheckbox>
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/f4/1f4p_consurf.spt"</scriptWhenChecked>
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
    <text>to colour the structure by Evolutionary Conservation</text>
  </jmolCheckbox>
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1f4p ConSurf].
<div style="clear:both"></div>


===Y98W FLAVODOXIN MUTANT 1.5A (D. VULGARIS)===
==See Also==
 
*[[Flavodoxin 3D structures|Flavodoxin 3D structures]]
 
__TOC__
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</StructureSection>
The line below this paragraph, {{ABSTRACT_PUBMED_11264581}}, adds the Publication Abstract to the page
(as it appears on PubMed at http://www.pubmed.gov), where 11264581 is the PubMed ID number.
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{{ABSTRACT_PUBMED_11264581}}
 
==About this Structure==
1F4P is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Desulfovibrio_vulgaris Desulfovibrio vulgaris]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1F4P OCA].
 
==Reference==
Structures and comparison of the Y98H (2.0 A) and Y98W (1.5 A) mutants of flavodoxin (Desulfovibrio vulgaris)., Reynolds RA, Watt W, Watenpaugh KD, Acta Crystallogr D Biol Crystallogr. 2001 Apr;57(Pt 4):527-35. PMID:[http://www.ncbi.nlm.nih.gov/pubmed/11264581 11264581]
[[Category: Desulfovibrio vulgaris]]
[[Category: Desulfovibrio vulgaris]]
[[Category: Single protein]]
[[Category: Large Structures]]
[[Category: Reynolds, R A.]]
[[Category: Reynolds RA]]
[[Category: Watenpaugh, K D.]]
[[Category: Watenpaugh KD]]
[[Category: Watt, W.]]
[[Category: Watt W]]
[[Category: 3d-strcture]]
[[Category: Anisotropic refinement]]
[[Category: Electron transport]]
[[Category: Flavoprotein]]
[[Category: Fmn]]
[[Category: Redox protein]]
 
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Tue Jul  1 02:41:13 2008''

Latest revision as of 10:10, 7 February 2024

Y98W FLAVODOXIN MUTANT 1.5A (D. VULGARIS)Y98W FLAVODOXIN MUTANT 1.5A (D. VULGARIS)

Structural highlights

1f4p is a 1 chain structure with sequence from Desulfovibrio vulgaris. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Method:X-ray diffraction, Resolution 1.3Å
Ligands:
Resources:FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT

Function

FLAV_DESVH Low-potential electron donor to a number of redox enzymes.

Evolutionary Conservation

Check, as determined by ConSurfDB. You may read the explanation of the method and the full data available from ConSurf.

See Also

1f4p, resolution 1.30Å

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OCA
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