1f1u: Difference between revisions

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-{{Seed}}
-[[Image:1f1u.png|left|200px]]
-<!--
+==CRYSTAL STRUCTURE OF HOMOPROTOCATECHUATE 2,3-DIOXYGENASE FROM ARTHROBACTER GLOBIFORMIS (NATIVE, LOW TEMPERATURE)==
-The line below this paragraph, containing "STRUCTURE_1f1u", creates the "Structure Box" on the page.
+<StructureSection load='1f1u' size='340' side='right'caption='[[1f1u]], [[Resolution|resolution]] 1.50&Aring;' scene=''>
-You may change the PDB parameter (which sets the PDB file loaded into the applet)
+== Structural highlights ==
-or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+<table><tr><td colspan='2'>[[1f1u]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Arthrobacter_globiformis Arthrobacter globiformis]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1F1U OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1F1U FirstGlance]. <br>
-or leave the SCENE parameter empty for the default display.
+</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.5&#8491;</td></tr>
--->
+<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MN:MANGANESE+(II)+ION'>MN</scene></td></tr>
-{{STRUCTURE_1f1u|  PDB=1f1u  |  SCENE=  }}
+<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1f1u FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1f1u OCA], [https://pdbe.org/1f1u PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1f1u RCSB], [https://www.ebi.ac.uk/pdbsum/1f1u PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1f1u ProSAT]</span></td></tr>
+</table>
+== Function ==
+[https://www.uniprot.org/uniprot/Q44048_ARTGO Q44048_ARTGO]
+== Evolutionary Conservation ==
+[[Image:Consurf_key_small.gif|200px|right]]
+Check<jmol>
+  <jmolCheckbox>
+    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/f1/1f1u_consurf.spt"</scriptWhenChecked>
+    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
+    <text>to colour the structure by Evolutionary Conservation</text>
+  </jmolCheckbox>
+</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1f1u ConSurf].
+<div style="clear:both"></div>
-===CRYSTAL STRUCTURE OF HOMOPROTOCATECHUATE 2,3-DIOXYGENASE FROM ARTHROBACTER GLOBIFORMIS (NATIVE, LOW TEMPERATURE)===
+==See Also==
+*[[Dioxygenase 3D structures|Dioxygenase 3D structures]]
+__TOC__
-<!--
+</StructureSection>
-The line below this paragraph, {{ABSTRACT_PUBMED_15028678}}, adds the Publication Abstract to the page
-(as it appears on PubMed at http://www.pubmed.gov), where 15028678 is the PubMed ID number.
--->
-{{ABSTRACT_PUBMED_15028678}}
-==About this Structure==
-F1U is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Arthrobacter_globiformis Arthrobacter globiformis]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1F1U OCA].
-==Reference==
-Crystallographic comparison of manganese- and iron-dependent homoprotocatechuate 2,3-dioxygenases., Vetting MW, Wackett LP, Que L Jr, Lipscomb JD, Ohlendorf DH, J Bacteriol. 2004 Apr;186(7):1945-58. PMID:[http://www.ncbi.nlm.nih.gov/pubmed/15028678 15028678]
-[[Category: 3,4-dihydroxyphenylacetate 2,3-dioxygenase]]
 [[Category: Arthrobacter globiformis]]
-[[Category: Single protein]]
+[[Category: Large Structures]]
-[[Category: Jr., L Que.]]
+[[Category: Lipscomb JD]]
-[[Category: Lipscomb, J D.]]
+[[Category: Ohlendorf DH]]
-[[Category: Ohlendorf, D H.]]
+[[Category: Que Jr L]]
-[[Category: Vetting, M W.]]
+[[Category: Vetting MW]]
-[[Category: Wackett, L P.]]
+[[Category: Wackett LP]]
-[[Category: Aromatic]]
-[[Category: Biodegradation]]
-[[Category: Dioxygenase]]
-[[Category: Extradiol]]
-[[Category: Manganese]]
-''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Tue Jul  1 02:20:55 2008''