1ez4: Difference between revisions

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-{{Seed}}
-[[Image:1ez4.png|left|200px]]
-<!--
+==CRYSTAL STRUCTURE OF NON-ALLOSTERIC L-LACTATE DEHYDROGENASE FROM LACTOBACILLUS PENTOSUS AT 2.3 ANGSTROM RESOLUTION==
-The line below this paragraph, containing "STRUCTURE_1ez4", creates the "Structure Box" on the page.
+<StructureSection load='1ez4' size='340' side='right'caption='[[1ez4]], [[Resolution|resolution]] 2.30&Aring;' scene=''>
-You may change the PDB parameter (which sets the PDB file loaded into the applet)
+== Structural highlights ==
-or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+<table><tr><td colspan='2'>[[1ez4]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Lactiplantibacillus_pentosus Lactiplantibacillus pentosus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1EZ4 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1EZ4 FirstGlance]. <br>
-or leave the SCENE parameter empty for the default display.
+</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.3&#8491;</td></tr>
--->
+<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=NAD:NICOTINAMIDE-ADENINE-DINUCLEOTIDE'>NAD</scene></td></tr>
-{{STRUCTURE_1ez4|  PDB=1ez4  |  SCENE=  }}
+<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1ez4 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1ez4 OCA], [https://pdbe.org/1ez4 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1ez4 RCSB], [https://www.ebi.ac.uk/pdbsum/1ez4 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1ez4 ProSAT]</span></td></tr>
+</table>
+== Function ==
+[https://www.uniprot.org/uniprot/LDH_LACPE LDH_LACPE]
+== Evolutionary Conservation ==
+[[Image:Consurf_key_small.gif|200px|right]]
+Check<jmol>
+  <jmolCheckbox>
+    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ez/1ez4_consurf.spt"</scriptWhenChecked>
+    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
+    <text>to colour the structure by Evolutionary Conservation</text>
+  </jmolCheckbox>
+</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1ez4 ConSurf].
+<div style="clear:both"></div>
-===CRYSTAL STRUCTURE OF NON-ALLOSTERIC L-LACTATE DEHYDROGENASE FROM LACTOBACILLUS PENTOSUS AT 2.3 ANGSTROM RESOLUTION===
+==See Also==
+*[[Lactate dehydrogenase 3D structures|Lactate dehydrogenase 3D structures]]
+__TOC__
-<!--
+</StructureSection>
-The line below this paragraph, {{ABSTRACT_PUBMED_11807949}}, adds the Publication Abstract to the page
+[[Category: Lactiplantibacillus pentosus]]
-(as it appears on PubMed at http://www.pubmed.gov), where 11807949 is the PubMed ID number.
+[[Category: Large Structures]]
--->
+[[Category: Fushinobu S]]
-{{ABSTRACT_PUBMED_11807949}}
+[[Category: Konno M]]
+[[Category: Matsuzawa H]]
-==About this Structure==
+[[Category: Taguchi H]]
-EZ4 is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Lactobacillus_pentosus Lactobacillus pentosus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1EZ4 OCA].
+[[Category: Uchikoba H]]
+[[Category: Wakagi T]]
-==Reference==
-Crystal structure of non-allosteric L-lactate dehydrogenase from Lactobacillus pentosus at 2.3 A resolution: specific interactions at subunit interfaces., Uchikoba H, Fushinobu S, Wakagi T, Konno M, Taguchi H, Matsuzawa H, Proteins. 2002 Feb 1;46(2):206-14. PMID:[http://www.ncbi.nlm.nih.gov/pubmed/11807949 11807949]
-[[Category: L-lactate dehydrogenase]]
-[[Category: Lactobacillus pentosus]]
-[[Category: Single protein]]
-[[Category: Fushinobu, S.]]
-[[Category: Konno, M.]]
-[[Category: Matsuzawa, H.]]
-[[Category: Taguchi, H.]]
-[[Category: Uchikoba, H.]]
-[[Category: Wakagi, T.]]
-[[Category: Rossmann fold]]
-''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Tue Jul  1 02:14:28 2008''