1dqv: Difference between revisions

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-{{Seed}}
-[[Image:1dqv.png|left|200px]]
-<!--
+==CRYSTAL STRUCTURE OF SYNAPTOTAGMIN III C2A/C2B==
-The line below this paragraph, containing "STRUCTURE_1dqv", creates the "Structure Box" on the page.
+<StructureSection load='1dqv' size='340' side='right'caption='[[1dqv]], [[Resolution|resolution]] 3.20&Aring;' scene=''>
-You may change the PDB parameter (which sets the PDB file loaded into the applet)
+== Structural highlights ==
-or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+<table><tr><td colspan='2'>[[1dqv]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Rattus_rattus Rattus rattus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1DQV OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1DQV FirstGlance]. <br>
-or leave the SCENE parameter empty for the default display.
+</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 3.2&#8491;</td></tr>
--->
+<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
-{{STRUCTURE_1dqv|  PDB=1dqv  |  SCENE=  }}
+<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1dqv FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1dqv OCA], [https://pdbe.org/1dqv PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1dqv RCSB], [https://www.ebi.ac.uk/pdbsum/1dqv PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1dqv ProSAT]</span></td></tr>
+</table>
+== Function ==
+[https://www.uniprot.org/uniprot/SYT3_RAT SYT3_RAT] May be involved in Ca(2+)-dependent exocytosis of secretory vesicles through Ca(2+) and phospholipid binding to the C2 domain or may serve as Ca(2+) sensors in the process of vesicular trafficking and exocytosis.
+== Evolutionary Conservation ==
+[[Image:Consurf_key_small.gif|200px|right]]
+Check<jmol>
+  <jmolCheckbox>
+    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/dq/1dqv_consurf.spt"</scriptWhenChecked>
+    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
+    <text>to colour the structure by Evolutionary Conservation</text>
+  </jmolCheckbox>
+</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1dqv ConSurf].
+<div style="clear:both"></div>
-===CRYSTAL STRUCTURE OF SYNAPTOTAGMIN III C2A/C2B===
+==See Also==
+*[[Synaptotagmin 3D structures|Synaptotagmin 3D structures]]
+__TOC__
-<!--
+</StructureSection>
-The line below this paragraph, {{ABSTRACT_PUBMED_10545502}}, adds the Publication Abstract to the page
+[[Category: Large Structures]]
-(as it appears on PubMed at http://www.pubmed.gov), where 10545502 is the PubMed ID number.
--->
-{{ABSTRACT_PUBMED_10545502}}
-==About this Structure==
-DQV is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Rattus_rattus Rattus rattus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1DQV OCA].
-==Reference==
-Crystal structure of the cytosolic C2A-C2B domains of synaptotagmin III. Implications for Ca(+2)-independent snare complex interaction., Sutton RB, Ernst JA, Brunger AT, J Cell Biol. 1999 Nov 1;147(3):589-98. PMID:[http://www.ncbi.nlm.nih.gov/pubmed/10545502 10545502]
 [[Category: Rattus rattus]]
-[[Category: Single protein]]
+[[Category: Brunger AT]]
-[[Category: Brunger, A T.]]
+[[Category: Ernst JA]]
-[[Category: Ernst, J A.]]
+[[Category: Sutton RB]]
-[[Category: Sutton, R B.]]
-[[Category: Beta sandwich]]
-[[Category: C2 domain]]
-[[Category: Calcium ion]]
-''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Mon Jun 30 23:29:08 2008''