1bin: Difference between revisions

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[[Image:1bin.png|left|200px]]


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==LEGHEMOGLOBIN A (ACETOMET)==
The line below this paragraph, containing "STRUCTURE_1bin", creates the "Structure Box" on the page.
<StructureSection load='1bin' size='340' side='right'caption='[[1bin]], [[Resolution|resolution]] 2.20&Aring;' scene=''>
You may change the PDB parameter (which sets the PDB file loaded into the applet)
== Structural highlights ==
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
<table><tr><td colspan='2'>[[1bin]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Glycine_max Glycine max]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1BIN OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1BIN FirstGlance]. <br>
or leave the SCENE parameter empty for the default display.
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.2&#8491;</td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ACT:ACETATE+ION'>ACT</scene>, <scene name='pdbligand=HEM:PROTOPORPHYRIN+IX+CONTAINING+FE'>HEM</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
{{STRUCTURE_1bin| PDB=1bin |  SCENE= }}
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1bin FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1bin OCA], [https://pdbe.org/1bin PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1bin RCSB], [https://www.ebi.ac.uk/pdbsum/1bin PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1bin ProSAT]</span></td></tr>
</table>
== Function ==
[https://www.uniprot.org/uniprot/LGBA_SOYBN LGBA_SOYBN] Provides oxygen to the bacteroids. This role is essential for symbiotic nitrogen fixation.
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
Check<jmol>
  <jmolCheckbox>
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/bi/1bin_consurf.spt"</scriptWhenChecked>
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
    <text>to colour the structure by Evolutionary Conservation</text>
  </jmolCheckbox>
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1bin ConSurf].
<div style="clear:both"></div>


===LEGHEMOGLOBIN A (ACETOMET)===
==See Also==
 
*[[Hemoglobin 3D structures|Hemoglobin 3D structures]]
 
__TOC__
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</StructureSection>
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(as it appears on PubMed at http://www.pubmed.gov), where 9086279 is the PubMed ID number.
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{{ABSTRACT_PUBMED_9086279}}
 
==About this Structure==
1BIN is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Glycine_max Glycine max]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1BIN OCA].
 
==Reference==
Characterization of recombinant soybean leghemoglobin a and apolar distal histidine mutants., Hargrove MS, Barry JK, Brucker EA, Berry MB, Phillips GN Jr, Olson JS, Arredondo-Peter R, Dean JM, Klucas RV, Sarath G, J Mol Biol. 1997 Mar 14;266(5):1032-42. PMID:[http://www.ncbi.nlm.nih.gov/pubmed/9086279 9086279]
[[Category: Glycine max]]
[[Category: Glycine max]]
[[Category: Single protein]]
[[Category: Large Structures]]
[[Category: Brucker, E A.]]
[[Category: Brucker EA]]
[[Category: Hargrove, M S.]]
[[Category: Hargrove MS]]
[[Category: Jr., G N.Phillips.]]
[[Category: Phillips Jr GN]]
[[Category: Heme]]
[[Category: Multigene family]]
[[Category: Nitrogen fixation]]
[[Category: Oxygen transport]]
 
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Mon Jun 30 19:13:35 2008''

Latest revision as of 09:36, 7 February 2024

LEGHEMOGLOBIN A (ACETOMET)LEGHEMOGLOBIN A (ACETOMET)

Structural highlights

1bin is a 2 chain structure with sequence from Glycine max. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Method:X-ray diffraction, Resolution 2.2Å
Ligands:, ,
Resources:FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT

Function

LGBA_SOYBN Provides oxygen to the bacteroids. This role is essential for symbiotic nitrogen fixation.

Evolutionary Conservation

Check, as determined by ConSurfDB. You may read the explanation of the method and the full data available from ConSurf.

See Also

1bin, resolution 2.20Å

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)Proteopedia Page Contributors and Editors (what is this?)

OCA
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