3c46: Difference between revisions

Latest revision as of 12:32, 21 February 2024

X-ray crystal structure of the N4 mini-vRNAP P2_7a promoter complex soaked with MgCl2X-ray crystal structure of the N4 mini-vRNAP P2_7a promoter complex soaked with MgCl2

Structural highlights

3c46 is a 4 chain structure with sequence from Escherichia phage N4. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Method:	X-ray diffraction, Resolution 2Å
Ligands:
Resources:	FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT

Function

RPOLV_BPN4 DNA-dependent RNA polymerase, which is injected into the host upon infection and transcribes the phage early genes from promoters that have a 5-bp stem-3 nt loop hairpin structure.^[1] ^[2]

References

↑ Murakami KS, Davydova EK, Rothman-Denes LB. X-ray crystal structure of the polymerase domain of the bacteriophage N4 virion RNA polymerase. Proc Natl Acad Sci U S A. 2008 Mar 24;. PMID:18362338 doi:0712325105
↑ Gleghorn ML, Davydova EK, Rothman-Denes LB, Murakami KS. Structural basis for DNA-hairpin promoter recognition by the bacteriophage N4 virion RNA polymerase. Mol Cell. 2008 Dec 5;32(5):707-17. PMID:19061645 doi:S1097-2765(08)00777-6

Proteopedia Page Contributors and Editors (what is this?)Proteopedia Page Contributors and Editors (what is this?)

OCA

[1] Murakami KS, Davydova EK, Rothman-Denes LB. X-ray crystal structure of the polymerase domain of the bacteriophage N4 virion RNA polymerase. Proc Natl Acad Sci U S A. 2008 Mar 24;. PMID:18362338 doi:0712325105

[2] Gleghorn ML, Davydova EK, Rothman-Denes LB, Murakami KS. Structural basis for DNA-hairpin promoter recognition by the bacteriophage N4 virion RNA polymerase. Mol Cell. 2008 Dec 5;32(5):707-17. PMID:19061645 doi:S1097-2765(08)00777-6

[1]

[2]

@@ Line 1: / Line 1: @@
-'''Unreleased structure'''
-The entry 3c46 is ON HOLD
+==X-ray crystal structure of the N4 mini-vRNAP P2_7a promoter complex soaked with MgCl2==
+<StructureSection load='3c46' size='340' side='right'caption='[[3c46]], [[Resolution|resolution]] 2.00&Aring;' scene=''>
+== Structural highlights ==
+<table><tr><td colspan='2'>[[3c46]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Escherichia_phage_N4 Escherichia phage N4]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3C46 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3C46 FirstGlance]. <br>
+</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2&#8491;</td></tr>
+<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=2HP:DIHYDROGENPHOSPHATE+ION'>2HP</scene></td></tr>
+<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3c46 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3c46 OCA], [https://pdbe.org/3c46 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3c46 RCSB], [https://www.ebi.ac.uk/pdbsum/3c46 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3c46 ProSAT]</span></td></tr>
+</table>
+== Function ==
+[https://www.uniprot.org/uniprot/RPOLV_BPN4 RPOLV_BPN4] DNA-dependent RNA polymerase, which is injected into the host upon infection and transcribes the phage early genes from promoters that have a 5-bp stem-3 nt loop hairpin structure.<ref>PMID:18362338</ref> <ref>PMID:19061645</ref>
-Authors: Gleghorn, M.L., Murakami, K.S.
+==See Also==
+*[[RNA polymerase 3D structures|RNA polymerase 3D structures]]
-Description: X-ray crystal structure of the N4 mini-vRNAP P2_7a promoter complex soaked with MgCl2
+== References ==
+<references/>
+__TOC__
-''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Jun 11 09:29:45 2008''
+</StructureSection>
+[[Category: Escherichia phage N4]]
+[[Category: Large Structures]]
+[[Category: Gleghorn ML]]
+[[Category: Murakami KS]]

3c46: Difference between revisions

Latest revision as of 12:32, 21 February 2024

X-ray crystal structure of the N4 mini-vRNAP P2_7a promoter complex soaked with MgCl2X-ray crystal structure of the N4 mini-vRNAP P2_7a promoter complex soaked with MgCl2

Structural highlights

Function

See Also

References

Contents

Proteopedia Page Contributors and Editors (what is this?)Proteopedia Page Contributors and Editors (what is this?)

Navigation menu

3c46: Difference between revisions

Latest revision as of 12:32, 21 February 2024

X-ray crystal structure of the N4 mini-vRNAP P2_7a promoter complex soaked with MgCl2X-ray crystal structure of the N4 mini-vRNAP P2_7a promoter complex soaked with MgCl2

Structural highlights

Function

See Also

References

Proteopedia Page Contributors and Editors (what is this?)Proteopedia Page Contributors and Editors (what is this?)

Navigation menu

Search