2yzc: Difference between revisions

Proteopedia Page Contributors and Editors (what is this?)Proteopedia Page Contributors and Editors (what is this?)

OCA

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-[[Image:2yzc.jpg|left|200px]]
-<!--
+==Crystal structure of uricase from Arthrobacter globiformis in complex with allantoate==
-The line below this paragraph, containing "STRUCTURE_2yzc", creates the "Structure Box" on the page.
+<StructureSection load='2yzc' size='340' side='right'caption='[[2yzc]], [[Resolution|resolution]] 1.88&Aring;' scene=''>
-You may change the PDB parameter (which sets the PDB file loaded into the applet)
+== Structural highlights ==
-or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+<table><tr><td colspan='2'>[[2yzc]] is a 8 chain structure with sequence from [https://en.wikipedia.org/wiki/Arthrobacter_globiformis Arthrobacter globiformis]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2YZC OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2YZC FirstGlance]. <br>
-or leave the SCENE parameter empty for the default display.
+</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.88&#8491;</td></tr>
--->
+<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=1AL:ALLANTOATE+ION'>1AL</scene></td></tr>
-{{STRUCTURE_2yzc|  PDB=2yzc  |  SCENE=  }}
+<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2yzc FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2yzc OCA], [https://pdbe.org/2yzc PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2yzc RCSB], [https://www.ebi.ac.uk/pdbsum/2yzc PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2yzc ProSAT]</span></td></tr>
+</table>
+== Function ==
+[https://www.uniprot.org/uniprot/URIC_ARTGO URIC_ARTGO]
+== Evolutionary Conservation ==
+[[Image:Consurf_key_small.gif|200px|right]]
+Check<jmol>
+  <jmolCheckbox>
+    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/yz/2yzc_consurf.spt"</scriptWhenChecked>
+    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
+    <text>to colour the structure by Evolutionary Conservation</text>
+  </jmolCheckbox>
+</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2yzc ConSurf].
+<div style="clear:both"></div>
-'''Crystal structure of uricase from Arthrobacter globiformis in complex with allantoate'''
+==See Also==
+*[[Urate oxidase 3D structures|Urate oxidase 3D structures]]
+__TOC__
-==About this Structure==
+</StructureSection>
-YZC is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Arthrobacter_globiformis Arthrobacter globiformis]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2YZC OCA].
 [[Category: Arthrobacter globiformis]]
-[[Category: Single protein]]
+[[Category: Large Structures]]
-[[Category: Urate oxidase]]
+[[Category: Hoque MM]]
-[[Category: Hoque, M M.]]
+[[Category: Hossain MT]]
-[[Category: Hossain, M T.]]
+[[Category: Juan ECM]]
-[[Category: Juan, E C.M.]]
+[[Category: Sekiguchi T]]
-[[Category: Sekiguchi, T.]]
+[[Category: Suzuki K]]
-[[Category: Suzuki, K.]]
+[[Category: Takenaka A]]
-[[Category: Takenaka, A.]]
-[[Category: Allantoate]]
-[[Category: Oxidoreductase]]
-[[Category: Uricase]]
-''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed May  7 08:49:53 2008''