2yzd: Difference between revisions

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[[Image:2yzd.jpg|left|200px]]


<!--
==Crystal structure of uricase from Arthrobacter globiformis in complex with 8-azaxanthin (inhibitor)==
The line below this paragraph, containing "STRUCTURE_2yzd", creates the "Structure Box" on the page.
<StructureSection load='2yzd' size='340' side='right'caption='[[2yzd]], [[Resolution|resolution]] 2.24&Aring;' scene=''>
You may change the PDB parameter (which sets the PDB file loaded into the applet)
== Structural highlights ==
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
<table><tr><td colspan='2'>[[2yzd]] is a 8 chain structure with sequence from [https://en.wikipedia.org/wiki/Arthrobacter_globiformis Arthrobacter globiformis]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2YZD OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2YZD FirstGlance]. <br>
or leave the SCENE parameter empty for the default display.
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.24&#8491;</td></tr>
-->
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=AZA:8-AZAXANTHINE'>AZA</scene></td></tr>
{{STRUCTURE_2yzd|  PDB=2yzd |  SCENE= }}
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2yzd FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2yzd OCA], [https://pdbe.org/2yzd PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2yzd RCSB], [https://www.ebi.ac.uk/pdbsum/2yzd PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2yzd ProSAT]</span></td></tr>
</table>
== Function ==
[https://www.uniprot.org/uniprot/URIC_ARTGO URIC_ARTGO]
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
Check<jmol>
  <jmolCheckbox>
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/yz/2yzd_consurf.spt"</scriptWhenChecked>
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
    <text>to colour the structure by Evolutionary Conservation</text>
  </jmolCheckbox>
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2yzd ConSurf].
<div style="clear:both"></div>


'''Crystal structure of uricase from Arthrobacter globiformis in complex with 8-azaxanthin (inhibitor)'''
==See Also==
 
*[[Urate oxidase 3D structures|Urate oxidase 3D structures]]
 
__TOC__
==About this Structure==
</StructureSection>
2YZD is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Arthrobacter_globiformis Arthrobacter globiformis]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2YZD OCA].
[[Category: Arthrobacter globiformis]]
[[Category: Arthrobacter globiformis]]
[[Category: Single protein]]
[[Category: Large Structures]]
[[Category: Urate oxidase]]
[[Category: Hoque MM]]
[[Category: Hoque, M M.]]
[[Category: Hossain MT]]
[[Category: Hossain, M T.]]
[[Category: Juan ECM]]
[[Category: Juan, E C.M.]]
[[Category: Sekiguchi T]]
[[Category: Sekiguchi, T.]]
[[Category: Suzuki K]]
[[Category: Suzuki, K.]]
[[Category: Takenaka A]]
[[Category: Takenaka, A.]]
[[Category: 8-azaxanthin]]
[[Category: Oxidoreductase]]
[[Category: Uricase]]
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed May  7 08:49:50 2008''

Latest revision as of 12:13, 25 October 2023

Crystal structure of uricase from Arthrobacter globiformis in complex with 8-azaxanthin (inhibitor)Crystal structure of uricase from Arthrobacter globiformis in complex with 8-azaxanthin (inhibitor)

Structural highlights

2yzd is a 8 chain structure with sequence from Arthrobacter globiformis. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Method:X-ray diffraction, Resolution 2.24Å
Ligands:
Resources:FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT

Function

URIC_ARTGO

Evolutionary Conservation

Check, as determined by ConSurfDB. You may read the explanation of the method and the full data available from ConSurf.

See Also

2yzd, resolution 2.24Å

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Proteopedia Page Contributors and Editors (what is this?)Proteopedia Page Contributors and Editors (what is this?)

OCA
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