1a2p: Difference between revisions

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New page: left|200px<br /><applet load="1a2p" size="450" color="white" frame="true" align="right" spinBox="true" caption="1a2p, resolution 1.50Å" /> '''BARNASE WILDTYPE STR...
 
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[[Image:1a2p.gif|left|200px]]<br /><applet load="1a2p" size="450" color="white" frame="true" align="right" spinBox="true"
caption="1a2p, resolution 1.50&Aring;" />
'''BARNASE WILDTYPE STRUCTURE AT 1.5 ANGSTROMS RESOLUTION'''<br />


==About this Structure==
==BARNASE WILDTYPE STRUCTURE AT 1.5 ANGSTROMS RESOLUTION==
1A2P is a [http://en.wikipedia.org/wiki/Single_protein Single protein] structure of sequence from [http://en.wikipedia.org/wiki/Bacillus_amyloliquefaciens Bacillus amyloliquefaciens] with ZN as [http://en.wikipedia.org/wiki/ligand ligand]. Full crystallographic information is available from [http://ispc.weizmann.ac.il/oca-bin/ocashort?id=1A2P OCA].  
<StructureSection load='1a2p' size='340' side='right'caption='[[1a2p]], [[Resolution|resolution]] 1.50&Aring;' scene=''>
== Structural highlights ==
<table><tr><td colspan='2'>[[1a2p]] is a 3 chain structure with sequence from [https://en.wikipedia.org/wiki/Bacillus_amyloliquefaciens Bacillus amyloliquefaciens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1A2P OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1A2P FirstGlance]. <br>
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.5&#8491;</td></tr>
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1a2p FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1a2p OCA], [https://pdbe.org/1a2p PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1a2p RCSB], [https://www.ebi.ac.uk/pdbsum/1a2p PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1a2p ProSAT]</span></td></tr>
</table>
== Function ==
[https://www.uniprot.org/uniprot/RNBR_BACAM RNBR_BACAM] Hydrolyzes phosphodiester bonds in RNA, poly- and oligoribonucleotides resulting in 3'-nucleoside monophosphates via 2',3'-cyclophosphate intermediates.
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
Check<jmol>
  <jmolCheckbox>
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/a2/1a2p_consurf.spt"</scriptWhenChecked>
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
    <text>to colour the structure by Evolutionary Conservation</text>
  </jmolCheckbox>
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1a2p ConSurf].
<div style="clear:both"></div>


==Reference==
==See Also==
Molecular structure of a new family of ribonucleases., Mauguen Y, Hartley RW, Dodson EJ, Dodson GG, Bricogne G, Chothia C, Jack A, Nature. 1982 May 13;297(5862):162-4. PMID:[http://ispc.weizmann.ac.il//pmbin/getpm?pmid=7078632 7078632]
*[[Barnase 3D structures|Barnase 3D structures]]
*[[Ribonuclease 3D structures|Ribonuclease 3D structures]]
__TOC__
</StructureSection>
[[Category: Bacillus amyloliquefaciens]]
[[Category: Bacillus amyloliquefaciens]]
[[Category: Single protein]]
[[Category: Large Structures]]
[[Category: Hartley, R.W.]]
[[Category: Hartley RW]]
[[Category: Martin, C.]]
[[Category: Martin C]]
[[Category: Mauguen, Y.]]
[[Category: Mauguen Y]]
[[Category: Richard, V.]]
[[Category: Richard V]]
[[Category: Salem, M.]]
[[Category: Salem M]]
[[Category: ZN]]
[[Category: alpha/beta protein]]
[[Category: microbial ribonuclease]]
[[Category: ribonuclease]]
 
''Page seeded by [http://ispc.weizmann.ac.il/oca OCA ] on Tue Nov 20 10:34:22 2007''

Latest revision as of 09:27, 7 February 2024

BARNASE WILDTYPE STRUCTURE AT 1.5 ANGSTROMS RESOLUTIONBARNASE WILDTYPE STRUCTURE AT 1.5 ANGSTROMS RESOLUTION

Structural highlights

1a2p is a 3 chain structure with sequence from Bacillus amyloliquefaciens. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Method:X-ray diffraction, Resolution 1.5Å
Ligands:
Resources:FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT

Function

RNBR_BACAM Hydrolyzes phosphodiester bonds in RNA, poly- and oligoribonucleotides resulting in 3'-nucleoside monophosphates via 2',3'-cyclophosphate intermediates.

Evolutionary Conservation

Check, as determined by ConSurfDB. You may read the explanation of the method and the full data available from ConSurf.

See Also

1a2p, resolution 1.50Å

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