2pwp: Difference between revisions

From Proteopedia
Jump to navigation Jump to search
No edit summary
No edit summary
 
(9 intermediate revisions by the same user not shown)
Line 1: Line 1:
[[Image:2pwp.gif|left|200px]]


<!--
==Crystal structure of spermidine synthase from Plasmodium falciparum in complex with spermidine==
The line below this paragraph, containing "STRUCTURE_2pwp", creates the "Structure Box" on the page.
<StructureSection load='2pwp' size='340' side='right'caption='[[2pwp]], [[Resolution|resolution]] 2.10&Aring;' scene=''>
You may change the PDB parameter (which sets the PDB file loaded into the applet)
== Structural highlights ==
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
<table><tr><td colspan='2'>[[2pwp]] is a 3 chain structure with sequence from [https://en.wikipedia.org/wiki/Plasmodium_falciparum_3D7 Plasmodium falciparum 3D7]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2PWP OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2PWP FirstGlance]. <br>
or leave the SCENE parameter empty for the default display.
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.1&#8491;</td></tr>
-->
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene>, <scene name='pdbligand=SPD:SPERMIDINE'>SPD</scene></td></tr>
{{STRUCTURE_2pwp|  PDB=2pwp |  SCENE= }}
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2pwp FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2pwp OCA], [https://pdbe.org/2pwp PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2pwp RCSB], [https://www.ebi.ac.uk/pdbsum/2pwp PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2pwp ProSAT]</span></td></tr>
</table>
== Function ==
[https://www.uniprot.org/uniprot/Q8II73_PLAF7 Q8II73_PLAF7]
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
Check<jmol>
  <jmolCheckbox>
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/pw/2pwp_consurf.spt"</scriptWhenChecked>
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
    <text>to colour the structure by Evolutionary Conservation</text>
  </jmolCheckbox>
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2pwp ConSurf].
<div style="clear:both"></div>


'''Crystal structure of spermidine synthase from Plasmodium falciparum in complex with spermidine'''
==See Also==
 
*[[Spermidine synthase 3D structures|Spermidine synthase 3D structures]]
 
__TOC__
==About this Structure==
</StructureSection>
2PWP is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Plasmodium_falciparum_3d7 Plasmodium falciparum 3d7]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2PWP OCA].
[[Category: Large Structures]]
[[Category: Plasmodium falciparum 3d7]]
[[Category: Plasmodium falciparum 3D7]]
[[Category: Single protein]]
[[Category: Arrowsmith CH]]
[[Category: Spermidine synthase]]
[[Category: Bochkarev A]]
[[Category: Arrowsmith, C H.]]
[[Category: Dong A]]
[[Category: Bochkarev, A.]]
[[Category: Edwards AM]]
[[Category: Dong, A.]]
[[Category: Hui R]]
[[Category: Edwards, A M.]]
[[Category: Kozieradzki I]]
[[Category: Hui, R.]]
[[Category: Lew J]]
[[Category: Kozieradzki, I.]]
[[Category: Plotnikov AN]]
[[Category: Lew, J.]]
[[Category: Qiu W]]
[[Category: Plotnikov, A N.]]
[[Category: Ren H]]
[[Category: Qiu, W.]]
[[Category: Schapira M]]
[[Category: Ren, H.]]
[[Category: Sundstrom M]]
[[Category: SGC, Structural Genomics Consortium.]]
[[Category: Vedadi M]]
[[Category: Schapira, M.]]
[[Category: Wasney G]]
[[Category: Sundstrom, M.]]
[[Category: Weigelt J]]
[[Category: Vedadi, M.]]
[[Category: Wu H]]
[[Category: Wasney, G.]]
[[Category: Zhao Y]]
[[Category: Weigelt, J.]]
[[Category: Wu, H.]]
[[Category: Zhao, Y.]]
[[Category: Sgc]]
[[Category: Spermidine]]
[[Category: Spermidine synthase]]
[[Category: Structural genomics consortium]]
[[Category: Transferase]]
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sun May  4 13:55:21 2008''

Latest revision as of 14:10, 30 August 2023

Crystal structure of spermidine synthase from Plasmodium falciparum in complex with spermidineCrystal structure of spermidine synthase from Plasmodium falciparum in complex with spermidine

Structural highlights

2pwp is a 3 chain structure with sequence from Plasmodium falciparum 3D7. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Method:X-ray diffraction, Resolution 2.1Å
Ligands:, ,
Resources:FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT

Function

Q8II73_PLAF7

Evolutionary Conservation

Check, as determined by ConSurfDB. You may read the explanation of the method and the full data available from ConSurf.

See Also

2pwp, resolution 2.10Å

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)Proteopedia Page Contributors and Editors (what is this?)

OCA