2p7n: Difference between revisions

From Proteopedia
Jump to navigation Jump to search
← Older edit
No edit summary
No edit summary
 
(9 intermediate revisions by the same user not shown)
Line 1: Line 1:
[[Image:2p7n.jpg|left|200px]]


<!--
==Crystal structure of the Pathogenicity island 1 effector protein from Chromobacterium violaceum. Northeast Structural Genomics Consortium (NESGC) target CvR69.==
The line below this paragraph, containing "STRUCTURE_2p7n", creates the "Structure Box" on the page.
<StructureSection load='2p7n' size='340' side='right'caption='[[2p7n]], [[Resolution|resolution]] 2.80&Aring;' scene=''>
You may change the PDB parameter (which sets the PDB file loaded into the applet)
== Structural highlights ==
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
<table><tr><td colspan='2'>[[2p7n]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/"chromobacterium_janthinum"_(zopf)_ford_1927 "chromobacterium janthinum" (zopf) ford 1927]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2P7N OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2P7N FirstGlance]. <br>
or leave the SCENE parameter empty for the default display.
</td></tr><tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
-->
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat"><div style='overflow: auto; max-height: 3em;'>[[2jaa|2jaa]]</div></td></tr>
{{STRUCTURE_2p7n|  PDB=2p7n  |  SCENE= }}
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">sipD, CV_2617 ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=536 "Chromobacterium janthinum" (Zopf) Ford 1927])</td></tr>
 
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2p7n FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2p7n OCA], [https://pdbe.org/2p7n PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2p7n RCSB], [https://www.ebi.ac.uk/pdbsum/2p7n PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2p7n ProSAT], [https://www.topsan.org/Proteins/NESGC/2p7n TOPSAN]</span></td></tr>
'''Crystal structure of the Pathogenicity island 1 effector protein from Chromobacterium violaceum. Northeast Structural Genomics Consortium (NESGC) target CvR69.'''
</table>
 
== Evolutionary Conservation ==
 
[[Image:Consurf_key_small.gif|200px|right]]
==About this Structure==
Check<jmol>
2P7N is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Chromobacterium_violaceum Chromobacterium violaceum]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2P7N OCA].  
  <jmolCheckbox>
[[Category: Chromobacterium violaceum]]
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/p7/2p7n_consurf.spt"</scriptWhenChecked>
[[Category: Single protein]]
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
[[Category: Abashidze, M.]]
    <text>to colour the structure by Evolutionary Conservation</text>
[[Category: Acton, T B.]]
  </jmolCheckbox>
[[Category: Baran, M C.]]
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2p7n ConSurf].
[[Category: Benach, J.]]
<div style="clear:both"></div>
[[Category: Cunningham, K.]]
__TOC__
[[Category: Hunt, J F.]]
</StructureSection>
[[Category: Janjua, H.]]
[[Category: Large Structures]]
[[Category: Liu, J.]]
[[Category: Abashidze, M]]
[[Category: Ma, L C.]]
[[Category: Acton, T B]]
[[Category: Montelione, G T.]]
[[Category: Baran, M C]]
[[Category: NESG, Northeast Structural Genomics Consortium.]]
[[Category: Benach, J]]
[[Category: Rost, B.]]
[[Category: Cunningham, K]]
[[Category: Seetharaman, J.]]
[[Category: Hunt, J F]]
[[Category: Tong, L.]]
[[Category: Janjua, H]]
[[Category: Xiao, R.]]
[[Category: Liu, J]]
[[Category: Zhao, L.]]
[[Category: Ma, L C]]
[[Category: Montelione, G T]]
[[Category: Structural genomic]]
[[Category: Rost, B]]
[[Category: Seetharaman, J]]
[[Category: Tong, L]]
[[Category: Xiao, R]]
[[Category: Zhao, L]]
[[Category: Cell invasion]]
[[Category: Cvr69]]
[[Category: Cvr69]]
[[Category: Nesg]]
[[Category: Nesg]]
[[Category: Northeast structural genomics consortium]]
[[Category: Pathogenicity island 1 effector protein]]
[[Category: Pathogenicity island 1 effector protein]]
[[Category: Protein structure initiative]]
[[Category: PSI, Protein structure initiative]]
[[Category: Psi-2]]
[[Category: Structural genomic]]
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sun May  4 12:33:36 2008''

Latest revision as of 18:18, 17 June 2021

Crystal structure of the Pathogenicity island 1 effector protein from Chromobacterium violaceum. Northeast Structural Genomics Consortium (NESGC) target CvR69.Crystal structure of the Pathogenicity island 1 effector protein from Chromobacterium violaceum. Northeast Structural Genomics Consortium (NESGC) target CvR69.

Structural highlights

2p7n is a 1 chain structure with sequence from "chromobacterium_janthinum"_(zopf)_ford_1927 "chromobacterium janthinum" (zopf) ford 1927. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
NonStd Res:
Gene:sipD, CV_2617 ("Chromobacterium janthinum" (Zopf) Ford 1927)
Resources:FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT, TOPSAN

Evolutionary Conservation

Check, as determined by ConSurfDB. You may read the explanation of the method and the full data available from ConSurf.

2p7n, resolution 2.80Å

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)Proteopedia Page Contributors and Editors (what is this?)

OCA
Retrieved from "https://proteopedia.openfox.io/wiki/index.php?title=2p7n&oldid=3414078"