2oo3: Difference between revisions

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[[Image:2oo3.gif|left|200px]]


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==Crystal structure of protein LPL1258 from Legionella pneumophila str. Philadelphia 1, Pfam DUF519==
The line below this paragraph, containing "STRUCTURE_2oo3", creates the "Structure Box" on the page.
<StructureSection load='2oo3' size='340' side='right'caption='[[2oo3]], [[Resolution|resolution]] 2.00&Aring;' scene=''>
You may change the PDB parameter (which sets the PDB file loaded into the applet)
== Structural highlights ==
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
<table><tr><td colspan='2'>[[2oo3]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Legionella_pneumophila_subsp._pneumophila Legionella pneumophila subsp. pneumophila]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2OO3 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2OO3 FirstGlance]. <br>
or leave the SCENE parameter empty for the default display.
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2&#8491;</td></tr>
-->
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
{{STRUCTURE_2oo3|  PDB=2oo3  |  SCENE= }}
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2oo3 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2oo3 OCA], [https://pdbe.org/2oo3 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2oo3 RCSB], [https://www.ebi.ac.uk/pdbsum/2oo3 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2oo3 ProSAT], [https://www.topsan.org/Proteins/NYSGXRC/2oo3 TOPSAN]</span></td></tr>
 
</table>
'''Crystal structure of protein LPL1258 from Legionella pneumophila str. Philadelphia 1, Pfam DUF519'''
== Function ==
 
[https://www.uniprot.org/uniprot/Q5ZVZ2_LEGPH Q5ZVZ2_LEGPH] Specifically methylates the adenine in position 2030 of 23S rRNA.[HAMAP-Rule:MF_00934]
 
== Evolutionary Conservation ==
==About this Structure==
[[Image:Consurf_key_small.gif|200px|right]]
2OO3 is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Legionella_pneumophila_subsp._pneumophila Legionella pneumophila subsp. pneumophila]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2OO3 OCA].  
Check<jmol>
  <jmolCheckbox>
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/oo/2oo3_consurf.spt"</scriptWhenChecked>
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
    <text>to colour the structure by Evolutionary Conservation</text>
  </jmolCheckbox>
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2oo3 ConSurf].
<div style="clear:both"></div>
__TOC__
</StructureSection>
[[Category: Large Structures]]
[[Category: Legionella pneumophila subsp. pneumophila]]
[[Category: Legionella pneumophila subsp. pneumophila]]
[[Category: Single protein]]
[[Category: Almo SC]]
[[Category: Almo, S C.]]
[[Category: Atwell S]]
[[Category: Atwell, S.]]
[[Category: Bain KT]]
[[Category: Bain, K T.]]
[[Category: Bonanno JB]]
[[Category: Bonanno, J B.]]
[[Category: Burley SK]]
[[Category: Burley, S K.]]
[[Category: Freeman J]]
[[Category: Freeman, J.]]
[[Category: Ozyurt S]]
[[Category: NYSGXRC, New York Structural GenomiX Research Consortium.]]
[[Category: Reyes C]]
[[Category: Ozyurt, S.]]
[[Category: Sauder JM]]
[[Category: Reyes, C.]]
[[Category: Slocombe A]]
[[Category: Sauder, M J.]]
[[Category: Smyth L]]
[[Category: Slocombe, A.]]
[[Category: Smyth, L.]]
[[Category: New york structural genomix research consortium]]
[[Category: Nysgxrc]]
[[Category: Protein structure initiative]]
[[Category: Psi-2]]
[[Category: Structural genomic]]
[[Category: Unknown function]]
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sun May  4 11:18:14 2008''

Latest revision as of 03:21, 28 December 2023

Crystal structure of protein LPL1258 from Legionella pneumophila str. Philadelphia 1, Pfam DUF519Crystal structure of protein LPL1258 from Legionella pneumophila str. Philadelphia 1, Pfam DUF519

Structural highlights

2oo3 is a 1 chain structure with sequence from Legionella pneumophila subsp. pneumophila. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Method:X-ray diffraction, Resolution 2Å
Ligands:
Resources:FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT, TOPSAN

Function

Q5ZVZ2_LEGPH Specifically methylates the adenine in position 2030 of 23S rRNA.[HAMAP-Rule:MF_00934]

Evolutionary Conservation

Check, as determined by ConSurfDB. You may read the explanation of the method and the full data available from ConSurf.

2oo3, resolution 2.00Å

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)Proteopedia Page Contributors and Editors (what is this?)

OCA
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