2fi1: Difference between revisions

From Proteopedia
Jump to navigation Jump to search
No edit summary
No edit summary
 
(10 intermediate revisions by the same user not shown)
Line 1: Line 1:
[[Image:2fi1.gif|left|200px]]


<!--
==The crystal structure of a hydrolase from Streptococcus pneumoniae TIGR4==
The line below this paragraph, containing "STRUCTURE_2fi1", creates the "Structure Box" on the page.
<StructureSection load='2fi1' size='340' side='right'caption='[[2fi1]], [[Resolution|resolution]] 1.40&Aring;' scene=''>
You may change the PDB parameter (which sets the PDB file loaded into the applet)
== Structural highlights ==
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
<table><tr><td colspan='2'>[[2fi1]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Streptococcus_pneumoniae_TIGR4 Streptococcus pneumoniae TIGR4]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2FI1 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2FI1 FirstGlance]. <br>
or leave the SCENE parameter empty for the default display.
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.4&#8491;</td></tr>
-->
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene></td></tr>
{{STRUCTURE_2fi1|  PDB=2fi1  |  SCENE= }}
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2fi1 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2fi1 OCA], [https://pdbe.org/2fi1 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2fi1 RCSB], [https://www.ebi.ac.uk/pdbsum/2fi1 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2fi1 ProSAT], [https://www.topsan.org/Proteins/MCSG/2fi1 TOPSAN]</span></td></tr>
 
</table>
'''The crystal structure of a hydrolase from Streptococcus pneumoniae TIGR4'''
== Function ==
 
[https://www.uniprot.org/uniprot/A0A0H2UPC8_STRPN A0A0H2UPC8_STRPN]  
 
== Evolutionary Conservation ==
==About this Structure==
[[Image:Consurf_key_small.gif|200px|right]]
2FI1 is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Streptococcus_pneumoniae Streptococcus pneumoniae]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2FI1 OCA].  
Check<jmol>
[[Category: Single protein]]
  <jmolCheckbox>
[[Category: Streptococcus pneumoniae]]
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/fi/2fi1_consurf.spt"</scriptWhenChecked>
[[Category: Abdullah, J.]]
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
[[Category: Collart, F.]]
    <text>to colour the structure by Evolutionary Conservation</text>
[[Category: Joachimiak, A.]]
  </jmolCheckbox>
[[Category: MCSG, Midwest Center for Structural Genomics.]]
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2fi1 ConSurf].
[[Category: Zhang, R.]]
<div style="clear:both"></div>
[[Category: Zhou, M.]]
__TOC__
[[Category: Haloacid dehalogenase-like family]]
</StructureSection>
[[Category: Hydrolase]]
[[Category: Large Structures]]
[[Category: Mcsg]]
[[Category: Streptococcus pneumoniae TIGR4]]
[[Category: Midwest center for structural genomic]]
[[Category: Abdullah J]]
[[Category: Protein structure initiative]]
[[Category: Collart F]]
[[Category: Psi]]
[[Category: Joachimiak A]]
[[Category: Structural genomic]]
[[Category: Zhang R]]
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sun May  4 03:55:24 2008''
[[Category: Zhou M]]

Latest revision as of 12:23, 14 February 2024

The crystal structure of a hydrolase from Streptococcus pneumoniae TIGR4The crystal structure of a hydrolase from Streptococcus pneumoniae TIGR4

Structural highlights

2fi1 is a 1 chain structure with sequence from Streptococcus pneumoniae TIGR4. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Method:X-ray diffraction, Resolution 1.4Å
Ligands:
Resources:FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT, TOPSAN

Function

A0A0H2UPC8_STRPN

Evolutionary Conservation

Check, as determined by ConSurfDB. You may read the explanation of the method and the full data available from ConSurf.

2fi1, resolution 1.40Å

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)Proteopedia Page Contributors and Editors (what is this?)

OCA