2ef5: Difference between revisions

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[[Image:2ef5.gif|left|200px]]


<!--
==Crystal structure of the arginase from thermus thermophilus==
The line below this paragraph, containing "STRUCTURE_2ef5", creates the "Structure Box" on the page.
<StructureSection load='2ef5' size='340' side='right'caption='[[2ef5]], [[Resolution|resolution]] 2.00&Aring;' scene=''>
You may change the PDB parameter (which sets the PDB file loaded into the applet)
== Structural highlights ==
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
<table><tr><td colspan='2'>[[2ef5]] is a 6 chain structure with sequence from [https://en.wikipedia.org/wiki/Thermus_thermophilus Thermus thermophilus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2EF5 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2EF5 FirstGlance]. <br>
or leave the SCENE parameter empty for the default display.
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2&#8491;</td></tr>
-->
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=GAI:GUANIDINE'>GAI</scene>, <scene name='pdbligand=LYS:LYSINE'>LYS</scene>, <scene name='pdbligand=MN:MANGANESE+(II)+ION'>MN</scene></td></tr>
{{STRUCTURE_2ef5|  PDB=2ef5 |  SCENE= }}
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2ef5 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2ef5 OCA], [https://pdbe.org/2ef5 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2ef5 RCSB], [https://www.ebi.ac.uk/pdbsum/2ef5 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2ef5 ProSAT], [https://www.topsan.org/Proteins/RSGI/2ef5 TOPSAN]</span></td></tr>
</table>
== Function ==
[https://www.uniprot.org/uniprot/Q5SI78_THET8 Q5SI78_THET8]
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
Check<jmol>
  <jmolCheckbox>
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ef/2ef5_consurf.spt"</scriptWhenChecked>
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
    <text>to colour the structure by Evolutionary Conservation</text>
  </jmolCheckbox>
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2ef5 ConSurf].
<div style="clear:both"></div>


'''Crystal structure of the arginase from thermus thermophilus'''
==See Also==
 
*[[Arginase 3D structures|Arginase 3D structures]]
 
__TOC__
==About this Structure==
</StructureSection>
2EF5 is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Thermus_thermophilus Thermus thermophilus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2EF5 OCA].
[[Category: Large Structures]]
[[Category: Arginase]]
[[Category: Single protein]]
[[Category: Thermus thermophilus]]
[[Category: Karthe, P.]]
[[Category: Kumarevel, T S.]]
[[Category: Kuramitsu, S.]]
[[Category: RSGI, RIKEN Structural Genomics/Proteomics Initiative.]]
[[Category: Yokoyama, S.]]
[[Category: Arginase]]
[[Category: Hydrolase]]
[[Category: National project on protein structural and functional analyse]]
[[Category: Nppsfa]]
[[Category: Riken structural genomics/proteomics initiative]]
[[Category: Rsgi]]
[[Category: Structural genomic]]
[[Category: Thermus thermophilus]]
[[Category: Thermus thermophilus]]
[[Category: Ttha1496]]
[[Category: Karthe P]]
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sun May  4 02:27:28 2008''
[[Category: Kumarevel TS]]
[[Category: Kuramitsu S]]
[[Category: Yokoyama S]]

Latest revision as of 12:44, 25 December 2024

Crystal structure of the arginase from thermus thermophilusCrystal structure of the arginase from thermus thermophilus

Structural highlights

2ef5 is a 6 chain structure with sequence from Thermus thermophilus. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Method:X-ray diffraction, Resolution 2Å
Ligands:, ,
Resources:FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT, TOPSAN

Function

Q5SI78_THET8

Evolutionary Conservation

Check, as determined by ConSurfDB. You may read the explanation of the method and the full data available from ConSurf.

See Also

2ef5, resolution 2.00Å

Drag the structure with the mouse to rotate

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